fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G48670.1 NEQPQNLNLNLNQNYN at 232/321 in AT5G48670.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031689 not found in 242aa AT5G48670.1 not_1st 0.479392624 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G48670.1     MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS
gm031689_Glyma1 MTRKKVKLAFIANDSARKATFKKRKKGLMKKVSELSTLCGIDACAIVYSSYDPQPEVWPS
                *********:*:***:**************** ******** ****:**.**.:******

AT5G48670.1     NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC
gm031689_Glyma1 PMGVQRVLSKFRRMPELEQSKKMVNQESFLRQRIMKAKDQLKKQRKDNREKEMTQLMFQY
                  *****:*:** :**::* ****:**.**:*** **.: *::****.** ***::*** 

AT5G48670.1     LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEIGESSSVAVAASEGNIPM
gm031689_Glyma1 LSAGKIMHNISMVDLNDLAWLIDQNLKDINRRIEVLTKN------------VQSQPQIAA
                * ..  *.::.:******.::*:* ***:*****:* :.            . *: :*. 

AT5G48670.1     PNLVATTAPTTTIYEVGSSSSFAAVANFVNPIDLQQFRHPAAQHVGLNEQPQNLNLNLNQ
gm031689_Glyma1 P---VVTDVVAKVEDNGQGS----------------------QH---GQQGFDINVDL--
                *   ..*  .:.: : *..*                      **   .:*  ::*::*  

AT5G48670.1     NYNQNQEWFMEMMNHPEQMRYQTEQMGYQFMDDNHHNHIHHQPQEHQHQIHDESSNALDA
gm031689_Glyma1 --MQKQNWFMNLMN----------------------------------------NGSGDG
                   *:*:***::**                                        ..: *.

AT5G48670.1     ANSSSIIP-VTSSSITNKTW----FH
gm031689_Glyma1 GAGNEAMPFVGDVNQQNGFWPNPFFH
                . ... :* * . .  *  *    **
BoxShade v3.31 C (beta, 970507) Output
AT5G48670.1     M T R K K V K L A Y I S N D S S R K A T F K K R K K G L M K K V H E L S T L C G I T A C A I I Y S P Y D T N P E V W P S
gm031689_Glyma1    M T R K K V K L A F I A N D S A R K A T F K K R K K G L M K K V S E L S T L C G I D A C A I V Y S S Y D P Q P E V W P S
 
AT5G48670.1     N S G V Q R V V S E F R T L P E M D Q H K K M V D Q E G F L K Q R I A K A T E T L R R Q R K D S R E L E M T E V M F Q C
gm031689_Glyma1    P M G V Q R V L S K F R R M P E L E Q S K K M V N Q E S F L R Q R I M K A K D Q L K K Q R K D N R E K E M T Q L M F Q Y
 
AT5G48670.1     L I G N M E M F H L N I V D L N D L G Y M I E Q Y L K D V N R R I E I L R N S G T E I G E S S S V A V A A S E G N I P M
gm031689_Glyma1    L S A G K I M H N I S M V D L N D L A W L I D Q N L K D I N R R I E V L T K N - - - - - - - - - - - - V Q S Q P Q I A A
 
AT5G48670.1     P N L V A T T A P T T T I Y E V G S S S S F A A V A N F V N P I D L Q Q F R H P A A Q H V G L N E Q P Q N L N L N L N Q
gm031689_Glyma1    P - - - V V T D V V A K V E D N G Q G S - - - - - - - - - - - - - - - - - - - - - - Q H - - - G Q Q G F D I N V D L - -
 
AT5G48670.1     N Y N Q N Q E W F M E M M N H P E Q M R Y Q T E Q M G Y Q F M D D N H H N H I H H Q P Q E H Q H Q I H D E S S N A L D A
gm031689_Glyma1    - - M Q K Q N W F M N L M N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N G S G D G
 
AT5G48670.1     A N S S S I I P - V T S S S I T N K T W - - - - F H
gm031689_Glyma1    G A G N E A M P F V G D V N Q Q N G F W P N P F F H
 
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