fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042508 not found in 383aa AT4G25440.1 1st_not 0.408564814 II
Pt026344 not found in 454aa AT4G25440.1 1st_not 0.402777777 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G49200.1     MDYKA---------PRRYYSHGVVARQQDFA--------TDIVTRRR----------PYV
pt026344_POPTR_ MDFDYNGGNTTNTNKRVFNRLGGGQSANDTSNHNHLQQNQKVCYHWRAGRCN-RFPCPFL
gm042508_Glyma1 MDTKF---------ARRTERIG-----------------STTCSYWRAGRSTEKSPIP--
                ** .           *     *                        *          *  

AT5G49200.1     --PYDRPNKFS---------RSLVW---TSKEYKSPEGNNMPRTNDVSPKPPVLGLARKN
pt026344_POPTR_ HRELSAPPTHAAVNGGVGAKRGFVGNDSSSSSFSGRRGNNGTNGNNSNYSNSWGRFGNKG
gm042508_Glyma1 --PLRIP-------------RNMVQRKHCLEIMEIEEMQQG-------------------
                      *             *.:*      .  .  . ::                    

AT5G49200.1     AACGPMRSSSLRKWVCKYWKDGKCKRGEQCQFLHSWSCFPGLAMVASLEGHNKELKGIAL
pt026344_POPTR_ DGRG-VRGGSVEK-VCTYWVQGHCNRGDTCRFLHSWSLGDGFSLLTQLEGHQKVISGIAL
gm042508_Glyma1 --------------ICKYWINNNCVHGEQCLYLHSWFRGDGFSTVTKLHEHKKVITGIAL
                              :*.** :.:* :*: * :****    *:: ::.*. *:* :.****

AT5G49200.1     PEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSLISEGPWVFLGLPNAIKAFNVQ
pt026344_POPTR_ PSGSDKLYTGSKDETVRVWDCQSGQCMGVINLGGEVGCMISEGPWIFVGTPNVVKAWNTQ
gm042508_Glyma1 PVGSDKLYSGSTDGTVRIWDCHTGQCAKVINLGAEVTSLISEGSWIFVGLQNAVKAWNIQ
                * *****:: * * *:*:***::***   ***..*. .:****.*:*:*  *.:**:* *

AT5G49200.1     TSQDLHLQAAGVVGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSG
pt026344_POPTR_ TNTDLSLT--GPVGQVYTLVVGNDLLFAGTQDGSILVWKFNA-ATY-NFEPAASLNDHKM
gm042508_Glyma1 TMSEFTLD--GPKGRVRAMTVGNNTLFAGAEDGVIFAWRGSSKADS-PFELVASLTGHTK
                *  :: *   *  *:* ::.:.*. ****:..* *:.*: .: :    *:  :** .*. 

AT5G49200.1     EVTCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDKCLISSSLDGT
pt026344_POPTR_ AVVSLVVGANRLYSGSMDHSIKVWSLETLQCVQTLKDHTSVVMSLLCWEQFLLSCSLDQT
gm042508_Glyma1 AVVCLAVGCKMMYSGSMDQSIKVWDMDTLQCTMTLNDHTDVVTSLICWDQYLLSSSSDRT
                 *..:.** : :****:*::**:*.::****  **::**..* **:**:: *:*.* * *

AT5G49200.1     IKVWAYSENGILKVVQTRRQEQSSVHALSGMHDAEAKPIIFCSYQNGTVGIFDLPSFQER
pt026344_POPTR_ IKVWAATESGNLEVTYTHKEEHGLL-TLCGMHDLEGKPILLCSSNDSSVHLFDLPSFSEK
gm042508_Glyma1 IKVWACIEAGSLEVIYTHTEENGVV-SLFGMSDAEGKPILFSSCRDNSVHMYELPSFSER
                *****  * * *:*  *: :*:. : :* ** * *.***::.* .:.:* :::****.*:

AT5G49200.1     GRMFSTHTIATLTIGPQGLLFSGDESGNLRVWTLAAGNKV---
pt026344_POPTR_ GKIFAKQEIRAIQTGPGGLFFTGDGTGQVRVWNSVAVPTATT-
gm042508_Glyma1 GRLFANKDVALIELGPGGLFFTGDESGLLMVWKWLEVPKVASS
                *::*:.: :  :  ** **:*:** :* : **.     ..
BoxShade v3.31 C (beta, 970507) Output
AT5G49200.1     M D Y K A - - - - - - - - - P R R Y Y S H G V V A R Q Q D F A - - - - - - - - T D I V T R R R - - - - - - - - - - P Y V
pt026344_POPTR_    M D F D Y N G G N T T N T N K R V F N R L G G G Q S A N D T S N H N H L Q Q N Q K V C Y H W R A G R C N - R F P C P F L
gm042508_Glyma1    M D T K F - - - - - - - - - A R R T E R I G - - - - - - - - - - - - - - - - - S T T C S Y W R A G R S T E K S P I P - -
 
AT5G49200.1     - - P Y D R P N K F S - - - - - - - - - R S L V W - - - T S K E Y K S P E G N N M P R T N D V S P K P P V L G L A R K N
pt026344_POPTR_    H R E L S A P P T H A A V N G G V G A K R G F V G N D S S S S S F S G R R G N N G T N G N N S N Y S N S W G R F G N K G
gm042508_Glyma1    - - P L R I P - - - - - - - - - - - - - R N M V Q R K H C L E I M E I E E M Q Q G - - - - - - - - - - - - - - - - - - -
 
AT5G49200.1     A A C G P M R S S S L R K W V C K Y W K D G K C K R G E Q C Q F L H S W S C F P G L A M V A S L E G H N K E L K G I A L
pt026344_POPTR_    D G R G - V R G G S V E K - V C T Y W V Q G H C N R G D T C R F L H S W S L G D G F S L L T Q L E G H Q K V I S G I A L
gm042508_Glyma1    - - - - - - - - - - - - - - I C K Y W I N N N C V H G E Q C L Y L H S W F R G D G F S T V T K L H E H K K V I T G I A L
 
AT5G49200.1     P E G S D K L F S V S I D G T L R V W D C N S G Q C V H S I N L D A E A G S L I S E G P W V F L G L P N A I K A F N V Q
pt026344_POPTR_    P S G S D K L Y T G S K D E T V R V W D C Q S G Q C M G V I N L G G E V G C M I S E G P W I F V G T P N V V K A W N T Q
gm042508_Glyma1    P V G S D K L Y S G S T D G T V R I W D C H T G Q C A K V I N L G A E V T S L I S E G S W I F V G L Q N A V K A W N I Q
 
AT5G49200.1     T S Q D L H L Q A A G V V G Q V N A M T I A N G M L F A G T S S G S I L V W K A T T D S E S D P F K Y L T S L E G H S G
pt026344_POPTR_    T N T D L S L T - - G P V G Q V Y T L V V G N D L L F A G T Q D G S I L V W K F N A - A T Y - N F E P A A S L N D H K M
gm042508_Glyma1    T M S E F T L D - - G P K G R V R A M T V G N N T L F A G A E D G V I F A W R G S S K A D S - P F E L V A S L T G H T K
 
AT5G49200.1     E V T C F A V G G Q M L Y S G S V D K T I K M W D L N T L Q C I M T L K Q H T G T V T S L L C W D K C L I S S S L D G T
pt026344_POPTR_    A V V S L V V G A N R L Y S G S M D H S I K V W S L E T L Q C V Q T L K D H T S V V M S L L C W E Q F L L S C S L D Q T
gm042508_Glyma1    A V V C L A V G C K M M Y S G S M D Q S I K V W D M D T L Q C T M T L N D H T D V V T S L I C W D Q Y L L S S S S D R T
 
AT5G49200.1     I K V W A Y S E N G I L K V V Q T R R Q E Q S S V H A L S G M H D A E A K P I I F C S Y Q N G T V G I F D L P S F Q E R
pt026344_POPTR_    I K V W A A T E S G N L E V T Y T H K E E H G L L - T L C G M H D L E G K P I L L C S S N D S S V H L F D L P S F S E K
gm042508_Glyma1    I K V W A C I E A G S L E V I Y T H T E E N G V V - S L F G M S D A E G K P I L F S S C R D N S V H M Y E L P S F S E R
 
AT5G49200.1     G R M F S T H T I A T L T I G P Q G L L F S G D E S G N L R V W T L A A G N K V - - -
pt026344_POPTR_    G K I F A K Q E I R A I Q T G P G G L F F T G D G T G Q V R V W N S V A V P T A T T -
gm042508_Glyma1    G R L F A N K D V A L I E L G P G G L F F T G D E S G L L M V W K W L E V P K V A S S
 
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