fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026344 not found in 454aa AT4G25440.1 1st_not 0.402777777 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G49200.1     MDY--------KAPRRYYS-------------------------HGVVARQQDFATDIVT
pt026344_POPTR_ MDFDYNGGNTTNTNKRVFNRLGGGQSANDTSNHNHLQQNQKVCYHWRAGRCNRFPCPFLH
                **:        :: :* :.                         *  ..* : *.  :: 

AT5G49200.1     R-----------------RRPYVPYDRPNKFSRSLVWTSKEYKSPEGNNMPRTNDVSPKP
pt026344_POPTR_ RELSAPPTHAAVNGGVGAKRGFVGNDS----------SSSSFSGRRGNNGTNGNNSNYSN
                *                 :* :*  *           :*..:.. .*** .. *: . . 

AT5G49200.1     PVLGLARKNAACGPMRSSSLRKWVCKYWKDGKCKRGEQCQFLHSWSCFPGLAMVASLEGH
pt026344_POPTR_ SWGRFGNKGDGRG-VRGGSVEK-VCTYWVQGHCNRGDTCRFLHSWSLGDGFSLLTQLEGH
                .   :..*. . * :*..*:.* **.** :*:*:**: *:******   *:::::.****

AT5G49200.1     NKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSLISEGPWVFLGLP
pt026344_POPTR_ QKVISGIALPSGSDKLYTGSKDETVRVWDCQSGQCMGVINLGGEVGCMISEGPWIFVGTP
                :* :.*****.*****:: * * *:*****:****:  ***..*.*.:******:*:* *

AT5G49200.1     NAIKAFNVQTSQDLHLQAAGVVGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKY
pt026344_POPTR_ NVVKAWNTQTNTDLSL--TGPVGQVYTLVVGNDLLFAGTQDGSILVWKFNAATYN--FEP
                *.:**:*.**. ** *  :* **** ::.:.*.:*****..******* .: : .  *: 

AT5G49200.1     LTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDKC
pt026344_POPTR_ AASLNDHKMAVVSLVVGANRLYSGSMDHSIKVWSLETLQCVQTLKDHTSVVMSLLCWEQF
                 :**:.*.  *..:.**.: *****:*::**:*.*:****: ***:**..* *****:: 

AT5G49200.1     LISSSLDGTIKVWAYSENGILKVVQTRRQEQSSVHALSGMHDAEAKPIIFCSYQNGTVGI
pt026344_POPTR_ LLSCSLDQTIKVWAATESGNLEVTYTHKEEHGLL-TLCGMHDLEGKPILLCSSNDSSVHL
                *:*.*** ****** :*.* *:*. *:::*:. : :*.**** *.***::** ::.:* :

AT5G49200.1     FDLPSFQERGRMFSTHTIATLTIGPQGLLFSGDESGNLRVWTLAAGNKV--
pt026344_POPTR_ FDLPSFSEKGKIFAKQEIRAIQTGPGGLFFTGDGTGQVRVWNSVAVPTATT
                ******.*:*::*:.: * ::  ** **:*:** :*::***. .*  ..
BoxShade v3.31 C (beta, 970507) Output
AT5G49200.1     M D Y - - - - - - - - K A P R R Y Y S - - - - - - - - - - - - - - - - - - - - - - - - - H G V V A R Q Q D F A T D I V T
pt026344_POPTR_    M D F D Y N G G N T T N T N K R V F N R L G G G Q S A N D T S N H N H L Q Q N Q K V C Y H W R A G R C N R F P C P F L H
 
AT5G49200.1     R - - - - - - - - - - - - - - - - - R R P Y V P Y D R P N K F S R S L V W T S K E Y K S P E G N N M P R T N D V S P K P
pt026344_POPTR_    R E L S A P P T H A A V N G G V G A K R G F V G N D S - - - - - - - - - - S S S S F S G R R G N N G T N G N N S N Y S N
 
AT5G49200.1     P V L G L A R K N A A C G P M R S S S L R K W V C K Y W K D G K C K R G E Q C Q F L H S W S C F P G L A M V A S L E G H
pt026344_POPTR_    S W G R F G N K G D G R G - V R G G S V E K - V C T Y W V Q G H C N R G D T C R F L H S W S L G D G F S L L T Q L E G H
 
AT5G49200.1     N K E L K G I A L P E G S D K L F S V S I D G T L R V W D C N S G Q C V H S I N L D A E A G S L I S E G P W V F L G L P
pt026344_POPTR_    Q K V I S G I A L P S G S D K L Y T G S K D E T V R V W D C Q S G Q C M G V I N L G G E V G C M I S E G P W I F V G T P
 
AT5G49200.1     N A I K A F N V Q T S Q D L H L Q A A G V V G Q V N A M T I A N G M L F A G T S S G S I L V W K A T T D S E S D P F K Y
pt026344_POPTR_    N V V K A W N T Q T N T D L S L - - T G P V G Q V Y T L V V G N D L L F A G T Q D G S I L V W K F N A A T Y N - - F E P
 
AT5G49200.1     L T S L E G H S G E V T C F A V G G Q M L Y S G S V D K T I K M W D L N T L Q C I M T L K Q H T G T V T S L L C W D K C
pt026344_POPTR_    A A S L N D H K M A V V S L V V G A N R L Y S G S M D H S I K V W S L E T L Q C V Q T L K D H T S V V M S L L C W E Q F
 
AT5G49200.1     L I S S S L D G T I K V W A Y S E N G I L K V V Q T R R Q E Q S S V H A L S G M H D A E A K P I I F C S Y Q N G T V G I
pt026344_POPTR_    L L S C S L D Q T I K V W A A T E S G N L E V T Y T H K E E H G L L - T L C G M H D L E G K P I L L C S S N D S S V H L
 
AT5G49200.1     F D L P S F Q E R G R M F S T H T I A T L T I G P Q G L L F S G D E S G N L R V W T L A A G N K V - -
pt026344_POPTR_    F D L P S F S E K G K I F A K Q E I R A I Q T G P G G L F F T G D G T G Q V R V W N S V A V P T A T T
 
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