fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042508 not found in 383aa AT4G25440.1 1st_not 0.408564814 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G49200.1     MDYKAPRR----------YYSHGVVARQQDFATDIVTRRRPYVPYDRPNKFSRSLVWTSK
gm042508_Glyma1 MDTKFARRTERIGSTTCSYWRAG-------------------------------------
                ** * .**          *:  *                                     

AT5G49200.1     EYKSPEGNNMPRTNDVSPKPPV---LGLARKNAACGPMRSSSLRKWVCKYWKDGKCKRGE
gm042508_Glyma1 -----------RSTEKSPIPPLRIPRNMVQRKHCLEIMEIEEMQQGICKYWINNNCVHGE
                           *:.: ** **:    .:.::: .   *. ..::: :**** :.:* :**

AT5G49200.1     QCQFLHSWSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVH
gm042508_Glyma1 QCLYLHSWFRGDGFSTVTKLHEHKKVITGIALPVGSDKLYSGSTDGTVRIWDCHTGQCAK
                ** :****    *:: *:.*. *:* :.***** *****:* * ***:*:***::***.:

AT5G49200.1     SINLDAEAGSLISEGPWVFLGLPNAIKAFNVQTSQDLHLQAAGVVGQVNAMTIANGMLFA
gm042508_Glyma1 VINLGAEVTSLISEGSWIFVGLQNAVKAWNIQTMSEFTLD--GPKGRVRAMTVGNNTLFA
                 ***.**. ******.*:*:** **:**:*:** .:: *:  *  *:*.***:.*. ***

AT5G49200.1     GTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNT
gm042508_Glyma1 GAEDGVIFAWRGSSKADS-PFELVASLTGHTKAVVCLAVGCKMMYSGSMDQSIKVWDMDT
                *:..* *:.*:.::.::* **: ::** **:  *.*:*** :*:****:*::**:**::*

AT5G49200.1     LQCIMTLKQHTGTVTSLLCWDKCLISSSLDGTIKVWAYSENGILKVVQTRRQEQSSVHAL
gm042508_Glyma1 LQCTMTLNDHTDVVTSLICWDQYLLSSSSDRTIKVWACIEAGSLEVIYTHTEENGVV-SL
                *** ***::**..****:***: *:*** * ******  * * *:*: *: :*:. * :*

AT5G49200.1     SGMHDAEAKPIIFCSYQNGTVGIFDLPSFQERGRMFSTHTIATLTIGPQGLLFSGDESGN
gm042508_Glyma1 FGMSDAEGKPILFSSCRDNSVHMYELPSFSERGRLFANKDVALIELGPGGLFFTGDESGL
                 ** ***.***:*.* ::.:* :::****.****:*:.: :* : :** **:*:***** 

AT5G49200.1     LRVWTLAAGNKV---
gm042508_Glyma1 LMVWKWLEVPKVASS
                * **.     **
BoxShade v3.31 C (beta, 970507) Output
AT5G49200.1     M D Y K A P R R - - - - - - - - - - Y Y S H G V V A R Q Q D F A T D I V T R R R P Y V P Y D R P N K F S R S L V W T S K
gm042508_Glyma1    M D T K F A R R T E R I G S T T C S Y W R A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G49200.1     E Y K S P E G N N M P R T N D V S P K P P V - - - L G L A R K N A A C G P M R S S S L R K W V C K Y W K D G K C K R G E
gm042508_Glyma1    - - - - - - - - - - - R S T E K S P I P P L R I P R N M V Q R K H C L E I M E I E E M Q Q G I C K Y W I N N N C V H G E
 
AT5G49200.1     Q C Q F L H S W S C F P G L A M V A S L E G H N K E L K G I A L P E G S D K L F S V S I D G T L R V W D C N S G Q C V H
gm042508_Glyma1    Q C L Y L H S W F R G D G F S T V T K L H E H K K V I T G I A L P V G S D K L Y S G S T D G T V R I W D C H T G Q C A K
 
AT5G49200.1     S I N L D A E A G S L I S E G P W V F L G L P N A I K A F N V Q T S Q D L H L Q A A G V V G Q V N A M T I A N G M L F A
gm042508_Glyma1    V I N L G A E V T S L I S E G S W I F V G L Q N A V K A W N I Q T M S E F T L D - - G P K G R V R A M T V G N N T L F A
 
AT5G49200.1     G T S S G S I L V W K A T T D S E S D P F K Y L T S L E G H S G E V T C F A V G G Q M L Y S G S V D K T I K M W D L N T
gm042508_Glyma1    G A E D G V I F A W R G S S K A D S - P F E L V A S L T G H T K A V V C L A V G C K M M Y S G S M D Q S I K V W D M D T
 
AT5G49200.1     L Q C I M T L K Q H T G T V T S L L C W D K C L I S S S L D G T I K V W A Y S E N G I L K V V Q T R R Q E Q S S V H A L
gm042508_Glyma1    L Q C T M T L N D H T D V V T S L I C W D Q Y L L S S S S D R T I K V W A C I E A G S L E V I Y T H T E E N G V V - S L
 
AT5G49200.1     S G M H D A E A K P I I F C S Y Q N G T V G I F D L P S F Q E R G R M F S T H T I A T L T I G P Q G L L F S G D E S G N
gm042508_Glyma1    F G M S D A E G K P I L F S S C R D N S V H M Y E L P S F S E R G R L F A N K D V A L I E L G P G G L F F T G D E S G L
 
AT5G49200.1     L R V W T L A A G N K V - - -
gm042508_Glyma1    L M V W K W L E V P K V A S S
 
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