fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os015688 not found in 136aa AT3G06740.1 1st_not 0.40625 II
Gm045841 not found in 140aa AT3G06740.1 1st_not 0.43359375 II
Gm019345 not found in 130aa AT5G49300.1 not_1st 0.4296875 II
Pt034000 not found in 149aa AT3G06740.1 1st_not 0.5390625 II
Pt016129 SKLGVSLKLDLMGFRR in 91/133 AT5G49300.1 not_1st 0.42578125 II
Pt038574 MIMDLRTKGPESEDM in 3/147 AT5G49300.1 not_1st 0.41796875 II
SKLGVSLNLDLMGFKR in 93/147
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G49300.1     -MLDHSEKVLLVDSETMKTRAEDMIEQNN-TSVNDKKKTCADCGTSKTPLWRGGPVGPKS
pt038574_POPTR_ MIMD---------LRTKGPESEDMDNTHP-SKCNEIKRRCTDCQTTRTPCWRGGPAGPRT
pt016129_POPTR_ --MD---------FNTKGSESEDMDSTQS-SKGNEIKRRCMDCQTTRTPCWRGGPAGPRT
gm019345_Glyma0 -MVDPTGKGSEIEVEDSNSNPNAPSSGNSPSSNNEQKKTCADCGTTKTPLWRGGPAGPKS
pt034000_POPTR_ -MLDPCER--------QGSESEEMSSKSL-ETESPQKKTCADCGTSKTPLWRGGPAGPKS
gm045841_Glyma1 -MVDPTGKGSEVEVEDSNSNPNAPSSGNSPSSNNEQKKTCADCGTTKTPLWRGGPAGPKS
Os015688_Os03t0 --MDSSSV-------EKGSGSIDPDE----RTASGEPKACTDCHTTKTPLWRGGPSGPKS
                  :*              . .    .     . .   : * ** *::** ***** **::

AT5G49300.1     LCNACGIRNRKKRR--------GGTEDNKKLKKSSSG-------GG-------NRKFGE-
pt038574_POPTR_ LCNACGIRQRKRRRALLGLDKGGPERSREKMAKGS-----------------NSSKLGV-
pt016129_POPTR_ LCNACGIRQRKKRRALHGSDKGGAERSKNKIAKSS-----------------NSSKLGV-
gm019345_Glyma0 LCNACGIRSRKKKRAILGINK-GSNEDGRKGKRT----------GG--------------
pt034000_POPTR_ LCNACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTN-------NGSSNYNNNNKQLGD-
gm045841_Glyma1 LCNACGIRSRKKKRAILGINK-GSTEDGRKGKRTGGGGGIGGIGGG--------------
Os015688_Os03t0 LCNACGIRYRKKRREALGLDA-GEGGAERQEKKKS------------------KRERGEE
                ******** **::*        *     .:  :                           

AT5G49300.1     -SLKQSLMDLG---IRKRSTVEKQRQKLGEEEQAAVLLMALSYGSVYA------------
pt038574_POPTR_ -SLNLDLMGFKRDGMFQED----WKRKLGEEEQAAILLMALSCGSVCAWYKKDEGKHFYP
pt016129_POPTR_ -SLKLDLMGFRRDGILQED----WKRKLGEEEQAAILLMALSCGLVRA------------
gm019345_Glyma0 --------ALGKEVLLHRS----HWKKLGEEEKAAVLLMSLSYGSVYA------------
pt034000_POPTR_ -GLKQRLLALGREVLVQGSTVERRRRKLGEEEQAAVLLMALSYGSVYA------------
gm045841_Glyma1 --------ALGREVLLHRS----HWKKLGEEEKAAVLLMSLSYGSVYA------------
Os015688_Os03t0 VTMELRMVGFGKEVVLKQRRRMRRRRRLGEEEKAAILLMALSSGVIYA------------
                         :    : :        ::*****:**:***:** * : *
BoxShade v3.31 C (beta, 970507) Output
AT5G49300.1     - M L D H S E K V L L V D S E T M K T R A E D M I E Q N N - T S V N D K K K T C A D C G T S K T P L W R G G P V G P K S
pt038574_POPTR_    M I M D - - - - - - - - - L R T K G P E S E D M D N T H P - S K C N E I K R R C T D C Q T T R T P C W R G G P A G P R T
pt016129_POPTR_    - - M D - - - - - - - - - F N T K G S E S E D M D S T Q S - S K G N E I K R R C M D C Q T T R T P C W R G G P A G P R T
gm019345_Glyma0    - M V D P T G K G S E I E V E D S N S N P N A P S S G N S P S S N N E Q K K T C A D C G T T K T P L W R G G P A G P K S
pt034000_POPTR_    - M L D P C E R - - - - - - - - Q G S E S E E M S S K S L - E T E S P Q K K T C A D C G T S K T P L W R G G P A G P K S
gm045841_Glyma1    - M V D P T G K G S E V E V E D S N S N P N A P S S G N S P S S N N E Q K K T C A D C G T T K T P L W R G G P A G P K S
Os015688_Os03t0    - - M D S S S V - - - - - - - E K G S G S I D P D E - - - - R T A S G E P K A C T D C H T T K T P L W R G G P S G P K S
 
AT5G49300.1     L C N A C G I R N R K K R R - - - - - - - - G G T E D N K K L K K S S S G - - - - - - - G G - - - - - - - N R K F G E -
pt038574_POPTR_    L C N A C G I R Q R K R R R A L L G L D K G G P E R S R E K M A K G S - - - - - - - - - - - - - - - - - N S S K L G V -
pt016129_POPTR_    L C N A C G I R Q R K K R R A L H G S D K G G A E R S K N K I A K S S - - - - - - - - - - - - - - - - - N S S K L G V -
gm019345_Glyma0    L C N A C G I R S R K K K R A I L G I N K - G S N E D G R K G K R T - - - - - - - - - - G G - - - - - - - - - - - - - -
pt034000_POPTR_    L C N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N - - - - - - - N G S S N Y N N N N K Q L G D -
gm045841_Glyma1    L C N A C G I R S R K K K R A I L G I N K - G S T E D G R K G K R T G G G G G I G G I G G G - - - - - - - - - - - - - -
Os015688_Os03t0    L C N A C G I R Y R K K R R E A L G L D A - G E G G A E R Q E K K K S - - - - - - - - - - - - - - - - - - K R E R G E E
 
AT5G49300.1     - S L K Q S L M D L G - - - I R K R S T V E K Q R Q K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
pt038574_POPTR_    - S L N L D L M G F K R D G M F Q E D - - - - W K R K L G E E E Q A A I L L M A L S C G S V C A W Y K K D E G K H F Y P
pt016129_POPTR_    - S L K L D L M G F R R D G I L Q E D - - - - W K R K L G E E E Q A A I L L M A L S C G L V R A - - - - - - - - - - - -
gm019345_Glyma0    - - - - - - - - A L G K E V L L H R S - - - - H W K K L G E E E K A A V L L M S L S Y G S V Y A - - - - - - - - - - - -
pt034000_POPTR_    - G L K Q R L L A L G R E V L V Q G S T V E R R R R K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
gm045841_Glyma1    - - - - - - - - A L G R E V L L H R S - - - - H W K K L G E E E K A A V L L M S L S Y G S V Y A - - - - - - - - - - - -
Os015688_Os03t0    V T M E L R M V G F G K E V V L K Q R R R M R R R R R L G E E E K A A I L L M A L S S G V I Y A - - - - - - - - - - - -
 
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