fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os015688 not found in 136aa AT3G06740.1 1st_not 0.40625 II
Gm045841 not found in 140aa AT3G06740.1 1st_not 0.43359375 II
Gm019345 not found in 130aa AT5G49300.1 not_1st 0.4296875 II
Pt034000 not found in 149aa AT3G06740.1 1st_not 0.5390625 II
Pt033999 not found in 153aa AT3G06740.1 not_not 0.53515625 III
Pt034001 not found in 139aa AT3G06740.1 not_not 0.53125 III
Pt041905 not found in 138aa AT3G06740.1 not_not 0.50390625 III
Pt016129 SKLGVSLKLDLMGFRR in 91/133 AT5G49300.1 not_1st 0.42578125 II
Pt038574 MIMDLRTKGPESEDM in 3/147 AT5G49300.1 not_1st 0.41796875 II
SKLGVSLNLDLMGFKR in 93/147
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G49300.1     -MLDHSEKVLLVDSETMKTRAE----------DMIEQNNTSVNDKKKTCADCGTSKTPLW
pt034000_POPTR_ -MLDPCE--------RQGSESE----------EMSSKSLETESPQKKTCADCGTSKTPLW
pt033999_POPTR_ -MLSSVSLIV----FQQGSESE----------EMSSKSLETESPQKKTCADCGTSKTPLW
gm019345_Glyma0 -MVDPTG---------KGSEIEVEDSNSNPNAPSSGNSPSSNNEQKKTCADCGTTKTPLW
pt041905_POPTR_ -MLDPAN---------KGSESE----------EMSSNSQETESPLKKTCADCGTSKTPLW
pt034001_POPTR_ -MLDPCE--------RQGSESE----------EMSSKSLETESPQKKTCADCGTSKTPLW
pt038574_POPTR_ MIMDLRT---------KGPESE----------DMDNTHPSKCNEIKRRCTDCQTTRTPCW
pt016129_POPTR_ --MDFNT---------KGSESE----------DMDSTQSSKGNEIKRRCMDCQTTRTPCW
gm045841_Glyma1 -MVDPTG---------KGSEVEVEDSNSNPNAPSSGNSPSSNNEQKKTCADCGTTKTPLW
Os015688_Os03t0 --MDSSS-------VEKGSGSI----------DPDERTASGE---PKACTDCHTTKTPLW
                  :.              .                           : * ** *::** *

AT5G49300.1     RGGPVGPKSLCNACGIRNRKKRR-------G--GTEDNKKLKKSSSGGG------NRKFG
pt034000_POPTR_ RGGPAGPKSLCNACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSSNYNNNNKQLG
pt033999_POPTR_ RGGPAGPKSLCNACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSSNYNNNNKQLG
gm019345_Glyma0 RGGPAGPKSLCNACGIRSRKKKRAILGINKG--SNEDGRKGKRT----------------
pt041905_POPTR_ RGGPAGPKSLCNACGIRSRKKKRDILGLNKG--AANDKRAKKGSNNNGSSN-NNNNKQLG
pt034001_POPTR_ RGGPAGPKSLCNACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSS----------
pt038574_POPTR_ RGGPAGPRTLCNACGIRQRKRRRALLGLDKG--GPERSREKMAKGSNSS--------KLG
pt016129_POPTR_ RGGPAGPRTLCNACGIRQRKKRRALHGSDKG--GAERSKNKIAKSSNSS--------KLG
gm045841_Glyma1 RGGPAGPKSLCNACGIRSRKKKRAILGINKG--STEDGRKGKRTGGGGGIG------GIG
Os015688_Os03t0 RGGPSGPKSLCNACGIRYRKKRREALGLDAGEGGAERQEKKKSKRERGEE----------
                **** **::******** **::*       *  . :  .    .                

AT5G49300.1     ESLKQSLMDLG---IRKRSTVEKQRQKLGEEEQAAVLLMALSYGSVYA------------
pt034000_POPTR_ DGLKQRLLALGREVLVQGSTVERRRRKLGEEEQAAVLLMALSYGSVYA------------
pt033999_POPTR_ DGLKQRLLALGREVLVQGSTVERRRRKLGEEEQAAVLLMALSYGSVYA------------
gm019345_Glyma0 GG------ALGKEVLLHRSH----WKKLGEEEKAAVLLMSLSYGSVYA------------
pt041905_POPTR_ DGSKQRLLALGREVLMQ-------RRKLGEEEQAAVLLMALSYGSVYA------------
pt034001_POPTR_ DGLKQRLLALGREVLVQGSTVERRRRKLGEEEQAAVLLMALSYGSVYA------------
pt038574_POPTR_ VSLNLDLMGFKRDGMFQ----EDWKRKLGEEEQAAILLMALSCGSVCAWYKKDEGKHFYP
pt016129_POPTR_ VSLKLDLMGFRRDGILQ----EDWKRKLGEEEQAAILLMALSCGLVRA------------
gm045841_Glyma1 GG------ALGREVLLHRSH----WKKLGEEEKAAVLLMSLSYGSVYA------------
Os015688_Os03t0 VTMELRMVGFGKEVVLKQRRRMRRRRRLGEEEKAAILLMALSSGVIYA------------
                         :    : :        ::*****:**:***:** * : *
BoxShade v3.31 C (beta, 970507) Output
AT5G49300.1     - M L D H S E K V L L V D S E T M K T R A E - - - - - - - - - - D M I E Q N N T S V N D K K K T C A D C G T S K T P L W
pt034000_POPTR_    - M L D P C E - - - - - - - - R Q G S E S E - - - - - - - - - - E M S S K S L E T E S P Q K K T C A D C G T S K T P L W
pt033999_POPTR_    - M L S S V S L I V - - - - F Q Q G S E S E - - - - - - - - - - E M S S K S L E T E S P Q K K T C A D C G T S K T P L W
gm019345_Glyma0    - M V D P T G - - - - - - - - - K G S E I E V E D S N S N P N A P S S G N S P S S N N E Q K K T C A D C G T T K T P L W
pt041905_POPTR_    - M L D P A N - - - - - - - - - K G S E S E - - - - - - - - - - E M S S N S Q E T E S P L K K T C A D C G T S K T P L W
pt034001_POPTR_    - M L D P C E - - - - - - - - R Q G S E S E - - - - - - - - - - E M S S K S L E T E S P Q K K T C A D C G T S K T P L W
pt038574_POPTR_    M I M D L R T - - - - - - - - - K G P E S E - - - - - - - - - - D M D N T H P S K C N E I K R R C T D C Q T T R T P C W
pt016129_POPTR_    - - M D F N T - - - - - - - - - K G S E S E - - - - - - - - - - D M D S T Q S S K G N E I K R R C M D C Q T T R T P C W
gm045841_Glyma1    - M V D P T G - - - - - - - - - K G S E V E V E D S N S N P N A P S S G N S P S S N N E Q K K T C A D C G T T K T P L W
Os015688_Os03t0    - - M D S S S - - - - - - - V E K G S G S I - - - - - - - - - - D P D E R T A S G E - - - P K A C T D C H T T K T P L W
 
AT5G49300.1     R G G P V G P K S L C N A C G I R N R K K R R - - - - - - - G - - G T E D N K K L K K S S S G G G - - - - - - N R K F G
pt034000_POPTR_    R G G P A G P K S L C N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S N Y N N N N K Q L G
pt033999_POPTR_    R G G P A G P K S L C N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S N Y N N N N K Q L G
gm019345_Glyma0    R G G P A G P K S L C N A C G I R S R K K K R A I L G I N K G - - S N E D G R K G K R T - - - - - - - - - - - - - - - -
pt041905_POPTR_    R G G P A G P K S L C N A C G I R S R K K K R D I L G L N K G - - A A N D K R A K K G S N N N G S S N - N N N N K Q L G
pt034001_POPTR_    R G G P A G P K S L C N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S - - - - - - - - - -
pt038574_POPTR_    R G G P A G P R T L C N A C G I R Q R K R R R A L L G L D K G - - G P E R S R E K M A K G S N S S - - - - - - - - K L G
pt016129_POPTR_    R G G P A G P R T L C N A C G I R Q R K K R R A L H G S D K G - - G A E R S K N K I A K S S N S S - - - - - - - - K L G
gm045841_Glyma1    R G G P A G P K S L C N A C G I R S R K K K R A I L G I N K G - - S T E D G R K G K R T G G G G G I G - - - - - - G I G
Os015688_Os03t0    R G G P S G P K S L C N A C G I R Y R K K R R E A L G L D A G E G G A E R Q E K K K S K R E R G E E - - - - - - - - - -
 
AT5G49300.1     E S L K Q S L M D L G - - - I R K R S T V E K Q R Q K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
pt034000_POPTR_    D G L K Q R L L A L G R E V L V Q G S T V E R R R R K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
pt033999_POPTR_    D G L K Q R L L A L G R E V L V Q G S T V E R R R R K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
gm019345_Glyma0    G G - - - - - - A L G K E V L L H R S H - - - - W K K L G E E E K A A V L L M S L S Y G S V Y A - - - - - - - - - - - -
pt041905_POPTR_    D G S K Q R L L A L G R E V L M Q - - - - - - - R R K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
pt034001_POPTR_    D G L K Q R L L A L G R E V L V Q G S T V E R R R R K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
pt038574_POPTR_    V S L N L D L M G F K R D G M F Q - - - - E D W K R K L G E E E Q A A I L L M A L S C G S V C A W Y K K D E G K H F Y P
pt016129_POPTR_    V S L K L D L M G F R R D G I L Q - - - - E D W K R K L G E E E Q A A I L L M A L S C G L V R A - - - - - - - - - - - -
gm045841_Glyma1    G G - - - - - - A L G R E V L L H R S H - - - - W K K L G E E E K A A V L L M S L S Y G S V Y A - - - - - - - - - - - -
Os015688_Os03t0    V T M E L R M V G F G K E V V L K Q R R R M R R R R R L G E E E K A A I L L M A L S S G V I Y A - - - - - - - - - - - -
 
0