fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033999 not found in 153aa AT3G06740.1 not_not 0.53515625 III
Pt034001 not found in 139aa AT3G06740.1 not_not 0.53125 III
Pt041905 not found in 138aa AT3G06740.1 not_not 0.50390625 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G49300.1     MLDHSEKVLLVDSETMKTRAEDMIEQNNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLC
pt034001_POPTR_ MLDPCE--------RQGSESEEMSSKSLETESPQKKTCADCGTSKTPLWRGGPAGPKSLC
pt041905_POPTR_ MLDPAN---------KGSESEEMSSNSQETESPLKKTCADCGTSKTPLWRGGPAGPKSLC
pt033999_POPTR_ MLSSVSLIV----FQQGSESEEMSSKSLETESPQKKTCADCGTSKTPLWRGGPAGPKSLC
                **.  .           :.:*:* .:.  : .  *******************.******

AT5G49300.1     NACGIRNRKKRR-------GG-TEDNKKLKKSSSGGG-------NRKFGESLKQSLMDLG
pt034001_POPTR_ NACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSS----------DGLKQRLLALG
pt041905_POPTR_ NACGIRSRKKKRDILGLNKG--AANDKRAKKGSNNNGSSN-NNNNKQLGDGSKQRLLALG
pt033999_POPTR_ NACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSSNYNNNNKQLGDGLKQRLLALG
                ******.***:*       *  : ::*: **.*...*            :. ** *: **

AT5G49300.1     ---IRKRSTVEKQRQKLGEEEQAAVLLMALSYGSVYA
pt034001_POPTR_ REVLVQGSTVERRRRKLGEEEQAAVLLMALSYGSVYA
pt041905_POPTR_ REVLMQ-------RRKLGEEEQAAVLLMALSYGSVYA
pt033999_POPTR_ REVLVQGSTVERRRRKLGEEEQAAVLLMALSYGSVYA
                   : :       *:**********************
BoxShade v3.31 C (beta, 970507) Output
AT5G49300.1     M L D H S E K V L L V D S E T M K T R A E D M I E Q N N T S V N D K K K T C A D C G T S K T P L W R G G P V G P K S L C
pt034001_POPTR_    M L D P C E - - - - - - - - R Q G S E S E E M S S K S L E T E S P Q K K T C A D C G T S K T P L W R G G P A G P K S L C
pt041905_POPTR_    M L D P A N - - - - - - - - - K G S E S E E M S S N S Q E T E S P L K K T C A D C G T S K T P L W R G G P A G P K S L C
pt033999_POPTR_    M L S S V S L I V - - - - F Q Q G S E S E E M S S K S L E T E S P Q K K T C A D C G T S K T P L W R G G P A G P K S L C
 
AT5G49300.1     N A C G I R N R K K R R - - - - - - - G G - T E D N K K L K K S S S G G G - - - - - - - N R K F G E S L K Q S L M D L G
pt034001_POPTR_    N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S - - - - - - - - - - D G L K Q R L L A L G
pt041905_POPTR_    N A C G I R S R K K K R D I L G L N K G - - A A N D K R A K K G S N N N G S S N - N N N N K Q L G D G S K Q R L L A L G
pt033999_POPTR_    N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S N Y N N N N K Q L G D G L K Q R L L A L G
 
AT5G49300.1     - - - I R K R S T V E K Q R Q K L G E E E Q A A V L L M A L S Y G S V Y A
pt034001_POPTR_    R E V L V Q G S T V E R R R R K L G E E E Q A A V L L M A L S Y G S V Y A
pt041905_POPTR_    R E V L M Q - - - - - - - R R K L G E E E Q A A V L L M A L S Y G S V Y A
pt033999_POPTR_    R E V L V Q G S T V E R R R R K L G E E E Q A A V L L M A L S Y G S V Y A
 
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