fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034000 not found in 149aa AT3G06740.1 1st_not 0.5390625 II
Pt033999 not found in 153aa AT3G06740.1 not_not 0.53515625 III
Pt034001 not found in 139aa AT3G06740.1 not_not 0.53125 III
Pt041905 not found in 138aa AT3G06740.1 not_not 0.50390625 III
Pt016129 SKLGVSLKLDLMGFRR in 91/133 AT5G49300.1 not_1st 0.42578125 II
Pt038574 MIMDLRTKGPESEDM in 3/147 AT5G49300.1 not_1st 0.41796875 II
SKLGVSLNLDLMGFKR in 93/147
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G49300.1     MLDHSEKVLLVDSETMKTRAEDMIEQNNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLC
pt038574_POPTR_ --------MIMDLRTKGPESEDMDNTHPSKCNEIKRRCTDCQTTRTPCWRGGPAGPRTLC
pt016129_POPTR_ ----------MDFNTKGSESEDMDSTQSSKGNEIKRRCMDCQTTRTPCWRGGPAGPRTLC
pt041905_POPTR_ MLDPAN---------KGSESEEMSSNSQETESPLKKTCADCGTSKTPLWRGGPAGPKSLC
pt034001_POPTR_ MLDPCE--------RQGSESEEMSSKSLETESPQKKTCADCGTSKTPLWRGGPAGPKSLC
pt033999_POPTR_ MLSSVSLIV----FQQGSESEEMSSKSLETESPQKKTCADCGTSKTPLWRGGPAGPKSLC
pt034000_POPTR_ MLDPCE--------RQGSESEEMSSKSLETESPQKKTCADCGTSKTPLWRGGPAGPKSLC
                                 ..:*:* .    . .  *: * ** *::** *****.**::**

AT5G49300.1     NACGIRNRKKRR-------GG-TEDNKKLKKSSSGGG-------NRKFGESLKQSLMDLG
pt038574_POPTR_ NACGIRQRKRRRALLGLDKGGPERSREKMAKGSN----------SSKLGVSLNLDLMGFK
pt016129_POPTR_ NACGIRQRKKRRALHGSDKGGAERSKNKIAKSSN----------SSKLGVSLKLDLMGFR
pt041905_POPTR_ NACGIRSRKKKRDILGLNKG--AANDKRAKKGSNNNGSSN-NNNNKQLGDGSKQRLLALG
pt034001_POPTR_ NACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSS----------DGLKQRLLALG
pt033999_POPTR_ NACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSSNYNNNNKQLGDGLKQRLLALG
pt034000_POPTR_ NACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSSNYNNNNKQLGDGLKQRLLALG
                ******.**::*       *    . ::  *.*.                . :  *: : 

AT5G49300.1     ---IRKRSTVEKQRQKLGEEEQAAVLLMALSYGSVYA------------
pt038574_POPTR_ RDGMFQ----EDWKRKLGEEEQAAILLMALSCGSVCAWYKKDEGKHFYP
pt016129_POPTR_ RDGILQ----EDWKRKLGEEEQAAILLMALSCGLVRA------------
pt041905_POPTR_ REVLMQ-------RRKLGEEEQAAVLLMALSYGSVYA------------
pt034001_POPTR_ REVLVQGSTVERRRRKLGEEEQAAVLLMALSYGSVYA------------
pt033999_POPTR_ REVLVQGSTVERRRRKLGEEEQAAVLLMALSYGSVYA------------
pt034000_POPTR_ REVLVQGSTVERRRRKLGEEEQAAVLLMALSYGSVYA------------
                   : :       ::*********:****** * * *
BoxShade v3.31 C (beta, 970507) Output
AT5G49300.1     M L D H S E K V L L V D S E T M K T R A E D M I E Q N N T S V N D K K K T C A D C G T S K T P L W R G G P V G P K S L C
pt038574_POPTR_    - - - - - - - - M I M D L R T K G P E S E D M D N T H P S K C N E I K R R C T D C Q T T R T P C W R G G P A G P R T L C
pt016129_POPTR_    - - - - - - - - - - M D F N T K G S E S E D M D S T Q S S K G N E I K R R C M D C Q T T R T P C W R G G P A G P R T L C
pt041905_POPTR_    M L D P A N - - - - - - - - - K G S E S E E M S S N S Q E T E S P L K K T C A D C G T S K T P L W R G G P A G P K S L C
pt034001_POPTR_    M L D P C E - - - - - - - - R Q G S E S E E M S S K S L E T E S P Q K K T C A D C G T S K T P L W R G G P A G P K S L C
pt033999_POPTR_    M L S S V S L I V - - - - F Q Q G S E S E E M S S K S L E T E S P Q K K T C A D C G T S K T P L W R G G P A G P K S L C
pt034000_POPTR_    M L D P C E - - - - - - - - R Q G S E S E E M S S K S L E T E S P Q K K T C A D C G T S K T P L W R G G P A G P K S L C
 
AT5G49300.1     N A C G I R N R K K R R - - - - - - - G G - T E D N K K L K K S S S G G G - - - - - - - N R K F G E S L K Q S L M D L G
pt038574_POPTR_    N A C G I R Q R K R R R A L L G L D K G G P E R S R E K M A K G S N - - - - - - - - - - S S K L G V S L N L D L M G F K
pt016129_POPTR_    N A C G I R Q R K K R R A L H G S D K G G A E R S K N K I A K S S N - - - - - - - - - - S S K L G V S L K L D L M G F R
pt041905_POPTR_    N A C G I R S R K K K R D I L G L N K G - - A A N D K R A K K G S N N N G S S N - N N N N K Q L G D G S K Q R L L A L G
pt034001_POPTR_    N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S - - - - - - - - - - D G L K Q R L L A L G
pt033999_POPTR_    N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S N Y N N N N K Q L G D G L K Q R L L A L G
pt034000_POPTR_    N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S N Y N N N N K Q L G D G L K Q R L L A L G
 
AT5G49300.1     - - - I R K R S T V E K Q R Q K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
pt038574_POPTR_    R D G M F Q - - - - E D W K R K L G E E E Q A A I L L M A L S C G S V C A W Y K K D E G K H F Y P
pt016129_POPTR_    R D G I L Q - - - - E D W K R K L G E E E Q A A I L L M A L S C G L V R A - - - - - - - - - - - -
pt041905_POPTR_    R E V L M Q - - - - - - - R R K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
pt034001_POPTR_    R E V L V Q G S T V E R R R R K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
pt033999_POPTR_    R E V L V Q G S T V E R R R R K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
pt034000_POPTR_    R E V L V Q G S T V E R R R R K L G E E E Q A A V L L M A L S Y G S V Y A - - - - - - - - - - - -
 
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