fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os015688 not found in 136aa AT3G06740.1 1st_not 0.40625 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G49300.1     MLDHSEKVLLVDSETMKTRAEDMIEQNNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLC
Os015688_Os03t0 ----------MDSSSVE-KGSGSIDPDERTASGEPKACTDCHTTKTPLWRGGPSGPKSLC
                          :**.::: :... *: :: :...: *:*:** *:********* ******

AT5G49300.1     NACGIRNRKKRR---------GGTEDNKKLKKSSSGGGNRKFGESLKQSLMDLGIRKRST
Os015688_Os03t0 NACGIRYRKKRREALGLDAGEGGAERQEK-KKS-----KRERGEEVTMELRMVGFGKEVV
                ****** *****         **:* ::* ***     :*: **.:. .*  :*: *. .

AT5G49300.1     VE-----KQRQKLGEEEQAAVLLMALSYGSVYA
Os015688_Os03t0 LKQRRRMRRRRRLGEEEKAAILLMALSSGVIYA
                ::     ::*::*****:**:****** * :**
BoxShade v3.31 C (beta, 970507) Output
AT5G49300.1     M L D H S E K V L L V D S E T M K T R A E D M I E Q N N T S V N D K K K T C A D C G T S K T P L W R G G P V G P K S L C
Os015688_Os03t0    - - - - - - - - - - M D S S S V E - K G S G S I D P D E R T A S G E P K A C T D C H T T K T P L W R G G P S G P K S L C
 
AT5G49300.1     N A C G I R N R K K R R - - - - - - - - - G G T E D N K K L K K S S S G G G N R K F G E S L K Q S L M D L G I R K R S T
Os015688_Os03t0    N A C G I R Y R K K R R E A L G L D A G E G G A E R Q E K - K K S - - - - - K R E R G E E V T M E L R M V G F G K E V V
 
AT5G49300.1     V E - - - - - K Q R Q K L G E E E Q A A V L L M A L S Y G S V Y A
Os015688_Os03t0    L K Q R R R M R R R R R L G E E E K A A I L L M A L S S G V I Y A
 
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