fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045845 not found in 269aa AT5G49330.1 1st_1st 0.362790697 Ib
Pt033486 not found in 364aa AT5G49330.1 1st_1st 0.353488372 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G49330.1     MGRAPCCEKIGLKRGRWTAEEDEILTKYIQTNGEGSWRSLPKKAGLLRCGKSCRLRWINY
pt033486_POPTR_ MGRAPCCEKVGLKKGRWTAEEDEVLTKYILANGEGSWKSLPKNAGLLRCGKSCRLRWINY
gm045845_Glyma1 MGRAPCCEKVGLKKGRWTAEEDKILTDYIQENGEGSWRSLPKNAGLLRCGKSCRLRWINY
                *********:***:********::**.**  ******:****:*****************

AT5G49330.1     LRRDLKRGNITSDEEEIIVKLHSLLGNRWSLIATHLPGRTDNEIKNYWNSHLSRKIYAFT
pt033486_POPTR_ LRADLKRGNITKEEEETIVKLHTALGNRWSFIAAQLPGRTDNEIKNYWNSHLSRKIYSFN
gm045845_Glyma1 LRSDVKRGNITPQEEEIIVKLHAVLGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFM
                ** *:****** :*** *****: ******.** :***************** ****.* 

AT5G49330.1     AVSGDGHNLLVNDVVLKKSCSSSSGAKNNNKTKKKKKGRTSRSSMKKHKQM---------
pt033486_POPTR_ R--------YKNDDSLPSIMDITDVAA---GPYKGRGGRTSRSSMKKHKATLISLGKPKS
gm045845_Glyma1 K-------------SLNESLPPIDMAAVNVAANSKR--RTVQPTLKRS------------
                               * .     . *     . . :  ** :.::*:             

AT5G49330.1     ---------------------------VTASQCFSQPKELESDFSEGGQNG---------
pt033486_POPTR_ PKAIAHEVTEPASKETAAISPKGTNSSLKSSATEGPQKEPENRKNLGVQVQESCIDIAKR
gm045845_Glyma1 ----------------------------ATSQSFINDEENPTEYSLDGYCE---------
                                             :*      :*  .  . .             

AT5G49330.1     -NFEG------------ESLGPYEWLDGELERLLSSCVWECTSEEAVIGVNDEKVCESGD
pt033486_POPTR_ INAAGISHCPINDEKETETLGPYEWLDSEIKRLEYAL--------------QRQVADPFG
gm045845_Glyma1 -NTYGTTASCLSSMDEVEALGPYQWLDDEIMKLTHIC--------------------SSV
                 *  *            *:****:***.*: :*                        .  

AT5G49330.1     NSSCCVNLFEEEQGSETKIGHVGITEVDHDMTVEREREGS-----------------FLS
pt033486_POPTR_ NNTV-------------------VTLETDNEAPSMSKESE---NYNGVMGPKRVAVHYLK
gm045845_Glyma1 NS---------------------VYDYHHHQWPDMQLEGSVDQSYN--------PWDFCE
                *.                     :    ..   . . *..                 : .

AT5G49330.1     SNSNENNDKDWWVGLCNSSEVGFGV------------DEELLDWEFQGNVTCQSDDLWDL
pt033486_POPTR_ KQSNSSNG-------CSSNEESNGEWYNSFSPMNPRFDEEWLDWD------------WTI
gm045845_Glyma1 ENQNEAN--------CFWGTTGHN----------------------EGNGFYQ-------
                .:.*. *        *  .  . .                                    

AT5G49330.1     S-DIGEITLE
pt033486_POPTR_ AGDLGGWGLL
gm045845_Glyma1 ----------
BoxShade v3.31 C (beta, 970507) Output
AT5G49330.1     M G R A P C C E K I G L K R G R W T A E E D E I L T K Y I Q T N G E G S W R S L P K K A G L L R C G K S C R L R W I N Y
pt033486_POPTR_    M G R A P C C E K V G L K K G R W T A E E D E V L T K Y I L A N G E G S W K S L P K N A G L L R C G K S C R L R W I N Y
gm045845_Glyma1    M G R A P C C E K V G L K K G R W T A E E D K I L T D Y I Q E N G E G S W R S L P K N A G L L R C G K S C R L R W I N Y
 
AT5G49330.1     L R R D L K R G N I T S D E E E I I V K L H S L L G N R W S L I A T H L P G R T D N E I K N Y W N S H L S R K I Y A F T
pt033486_POPTR_    L R A D L K R G N I T K E E E E T I V K L H T A L G N R W S F I A A Q L P G R T D N E I K N Y W N S H L S R K I Y S F N
gm045845_Glyma1    L R S D V K R G N I T P Q E E E I I V K L H A V L G N R W S V I A G H L P G R T D N E I K N Y W N S H L R R K I Y C F M
 
AT5G49330.1     A V S G D G H N L L V N D V V L K K S C S S S S G A K N N N K T K K K K K G R T S R S S M K K H K Q M - - - - - - - - -
pt033486_POPTR_    R - - - - - - - - Y K N D D S L P S I M D I T D V A A - - - G P Y K G R G G R T S R S S M K K H K A T L I S L G K P K S
gm045845_Glyma1    K - - - - - - - - - - - - - S L N E S L P P I D M A A V N V A A N S K R - - R T V Q P T L K R S - - - - - - - - - - - -
 
AT5G49330.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - V T A S Q C F S Q P K E L E S D F S E G G Q N G - - - - - - - - -
pt033486_POPTR_    P K A I A H E V T E P A S K E T A A I S P K G T N S S L K S S A T E G P Q K E P E N R K N L G V Q V Q E S C I D I A K R
gm045845_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - A T S Q S F I N D E E N P T E Y S L D G Y C E - - - - - - - - -
 
AT5G49330.1     - N F E G - - - - - - - - - - - - E S L G P Y E W L D G E L E R L L S S C V W E C T S E E A V I G V N D E K V C E S G D
pt033486_POPTR_    I N A A G I S H C P I N D E K E T E T L G P Y E W L D S E I K R L E Y A L - - - - - - - - - - - - - - Q R Q V A D P F G
gm045845_Glyma1    - N T Y G T T A S C L S S M D E V E A L G P Y Q W L D D E I M K L T H I C - - - - - - - - - - - - - - - - - - - - S S V
 
AT5G49330.1     N S S C C V N L F E E E Q G S E T K I G H V G I T E V D H D M T V E R E R E G S - - - - - - - - - - - - - - - - - F L S
pt033486_POPTR_    N N T V - - - - - - - - - - - - - - - - - - - V T L E T D N E A P S M S K E S E - - - N Y N G V M G P K R V A V H Y L K
gm045845_Glyma1    N S - - - - - - - - - - - - - - - - - - - - - V Y D Y H H H Q W P D M Q L E G S V D Q S Y N - - - - - - - - P W D F C E
 
AT5G49330.1     S N S N E N N D K D W W V G L C N S S E V G F G V - - - - - - - - - - - - D E E L L D W E F Q G N V T C Q S D D L W D L
pt033486_POPTR_    K Q S N S S N G - - - - - - - C S S N E E S N G E W Y N S F S P M N P R F D E E W L D W D - - - - - - - - - - - - W T I
gm045845_Glyma1    E N Q N E A N - - - - - - - - C F W G T T G H N - - - - - - - - - - - - - - - - - - - - - - E G N G F Y Q - - - - - - -
 
AT5G49330.1     S - D I G E I T L E
pt033486_POPTR_    A G D L G G W G L L
gm045845_Glyma1    - - - - - - - - - -
 
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