fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045845 not found in 269aa AT5G49330.1 1st_1st 0.362790697 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G49330.1     MGRAPCCEKIGLKRGRWTAEEDEILTKYIQTNGEGSWRSLPKKAGLLRCGKSCRLRWINY
gm045845_Glyma1 MGRAPCCEKVGLKKGRWTAEEDKILTDYIQENGEGSWRSLPKNAGLLRCGKSCRLRWINY
                *********:***:********:***.*** ***********:*****************

AT5G49330.1     LRRDLKRGNITSDEEEIIVKLHSLLGNRWSLIATHLPGRTDNEIKNYWNSHLSRKIYAFT
gm045845_Glyma1 LRSDVKRGNITPQEEEIIVKLHAVLGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFM
                ** *:******.:*********::******:** ****************** ****.* 

AT5G49330.1     AVSGDGHNLLVNDVVLKKSCSSSSGAKNNNKTKKKKKGRTSRSSMKKHKQMVTASQCFSQ
gm045845_Glyma1 K-------------SLNESLPPIDMAAVNVAANSKR--RTVQPTLKRS----ATSQSFIN
                               *::* .. . *  *  ::.*:  ** :.::*:     ::**.* :

AT5G49330.1     PKELESDFSEGGQNGNFEG------------ESLGPYEWLDGELERLLSSCVWECTSEEA
gm045845_Glyma1 DEENPTEYSLDGYCENTYGTTASCLSSMDEVEALGPYQWLDDEIMKLTHIC---------
                 :*  :::* .*   *  *            *:****:***.*: :*   *         

AT5G49330.1     VIGVNDEKVCESGDNSSCCVNLFEEEQGSETKIGHVGITEVDHDMTVEREREGS------
gm045845_Glyma1 -----------SSVNS---------------------VYDYHHHQWPDMQLEGSVDQSYN
                           *. **                     : : .*.   : : ***      

AT5G49330.1     ---FLSSNSNENNDKDWWVGLCNSSEVGFGVDEELLDWEFQGNVTCQSDDLWDLSDIGEI
gm045845_Glyma1 PWDFCEENQNEAN--------CFWGTTGHN----------EGNGFYQ-------------
                   * ..*.** *        *  . .*..          :**   *             

AT5G49330.1     TLE
gm045845_Glyma1 ---
BoxShade v3.31 C (beta, 970507) Output
AT5G49330.1     M G R A P C C E K I G L K R G R W T A E E D E I L T K Y I Q T N G E G S W R S L P K K A G L L R C G K S C R L R W I N Y
gm045845_Glyma1    M G R A P C C E K V G L K K G R W T A E E D K I L T D Y I Q E N G E G S W R S L P K N A G L L R C G K S C R L R W I N Y
 
AT5G49330.1     L R R D L K R G N I T S D E E E I I V K L H S L L G N R W S L I A T H L P G R T D N E I K N Y W N S H L S R K I Y A F T
gm045845_Glyma1    L R S D V K R G N I T P Q E E E I I V K L H A V L G N R W S V I A G H L P G R T D N E I K N Y W N S H L R R K I Y C F M
 
AT5G49330.1     A V S G D G H N L L V N D V V L K K S C S S S S G A K N N N K T K K K K K G R T S R S S M K K H K Q M V T A S Q C F S Q
gm045845_Glyma1    K - - - - - - - - - - - - - S L N E S L P P I D M A A V N V A A N S K R - - R T V Q P T L K R S - - - - A T S Q S F I N
 
AT5G49330.1     P K E L E S D F S E G G Q N G N F E G - - - - - - - - - - - - E S L G P Y E W L D G E L E R L L S S C V W E C T S E E A
gm045845_Glyma1    D E E N P T E Y S L D G Y C E N T Y G T T A S C L S S M D E V E A L G P Y Q W L D D E I M K L T H I C - - - - - - - - -
 
AT5G49330.1     V I G V N D E K V C E S G D N S S C C V N L F E E E Q G S E T K I G H V G I T E V D H D M T V E R E R E G S - - - - - -
gm045845_Glyma1    - - - - - - - - - - - S S V N S - - - - - - - - - - - - - - - - - - - - - V Y D Y H H H Q W P D M Q L E G S V D Q S Y N
 
AT5G49330.1     - - - F L S S N S N E N N D K D W W V G L C N S S E V G F G V D E E L L D W E F Q G N V T C Q S D D L W D L S D I G E I
gm045845_Glyma1    P W D F C E E N Q N E A N - - - - - - - - C F W G T T G H N - - - - - - - - - - E G N G F Y Q - - - - - - - - - - - - -
 
AT5G49330.1     T L E
gm045845_Glyma1    - - -
 
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