Input
| Putative repression domain
|
|
AT5G49450.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt035022 |
not found in 143aa |
AT5G49450.1 |
1st_1st |
0.324427480 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G49450.1 --MANAEKTSSGSDI-------DEKKRKRKLSNRESARRSRLKKQKLMEDTIHEISSLER
pt035022_POPTR_ MPPSFAKAGSSGSEIDPPNAMVDEKRRKRMISNRESARRSRMKRQKYMEDLVTEKSILER
: *: ****:* ***:*** :**********:*:** *** : * * ***
AT5G49450.1 RIKENSERCRAVKQRLDSVETENAGLRSEKIWLSSYVSDLENMIATTSLTLTQSGGGDCV
pt035022_POPTR_ KIYEDNKKYAALWQRHFALESDNKVLTDEKLKLAEYLKNLQQVLA--SYNVIES------
:* *:.:: *: ** ::*::* * .**: *:.*:.:*::::* * .: :*
AT5G49450.1 DDQNANAGIAVGDCRRTPWKL--SCGSLQPMASFKT
pt035022_POPTR_ -DQD----LEVSDRFLNPWQVHGSVKSITASGMFKV
**: : *.* .**:: * *: . . **.
BoxShade v3.31 C (beta, 970507) Output
AT5G49450.1 |
- |
- |
M |
A |
N |
A |
E |
K |
T |
S |
S |
G |
S |
D |
I |
- |
- |
- |
- |
- |
- |
- |
D |
E |
K |
K |
R |
K |
R |
K |
L |
S |
N |
R |
E |
S |
A |
R |
R |
S |
R |
L |
K |
K |
Q |
K |
L |
M |
E |
D |
T |
I |
H |
E |
I |
S |
S |
L |
E |
R |
pt035022_POPTR_ |
M |
P |
P |
S |
F |
A |
K |
A |
G |
S |
S |
G |
S |
E |
I |
D |
P |
P |
N |
A |
M |
V |
D |
E |
K |
R |
R |
K |
R |
M |
I |
S |
N |
R |
E |
S |
A |
R |
R |
S |
R |
M |
K |
R |
Q |
K |
Y |
M |
E |
D |
L |
V |
T |
E |
K |
S |
I |
L |
E |
R |
|
AT5G49450.1 |
R |
I |
K |
E |
N |
S |
E |
R |
C |
R |
A |
V |
K |
Q |
R |
L |
D |
S |
V |
E |
T |
E |
N |
A |
G |
L |
R |
S |
E |
K |
I |
W |
L |
S |
S |
Y |
V |
S |
D |
L |
E |
N |
M |
I |
A |
T |
T |
S |
L |
T |
L |
T |
Q |
S |
G |
G |
G |
D |
C |
V |
pt035022_POPTR_ |
K |
I |
Y |
E |
D |
N |
K |
K |
Y |
A |
A |
L |
W |
Q |
R |
H |
F |
A |
L |
E |
S |
D |
N |
K |
V |
L |
T |
D |
E |
K |
L |
K |
L |
A |
E |
Y |
L |
K |
N |
L |
Q |
Q |
V |
L |
A |
- |
- |
S |
Y |
N |
V |
I |
E |
S |
- |
- |
- |
- |
- |
- |
|
AT5G49450.1 |
D |
D |
Q |
N |
A |
N |
A |
G |
I |
A |
V |
G |
D |
C |
R |
R |
T |
P |
W |
K |
L |
- |
- |
S |
C |
G |
S |
L |
Q |
P |
M |
A |
S |
F |
K |
T |
pt035022_POPTR_ |
- |
D |
Q |
D |
- |
- |
- |
- |
L |
E |
V |
S |
D |
R |
F |
L |
N |
P |
W |
Q |
V |
H |
G |
S |
V |
K |
S |
I |
T |
A |
S |
G |
M |
F |
K |
V |
|
|