fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035022 not found in 143aa AT5G49450.1 1st_1st 0.324427480 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G49450.1     --MANAEKTSSGSDI-------DEKKRKRKLSNRESARRSRLKKQKLMEDTIHEISSLER
pt035022_POPTR_ MPPSFAKAGSSGSEIDPPNAMVDEKRRKRMISNRESARRSRMKRQKYMEDLVTEKSILER
                   : *:  ****:*       ***:*** :**********:*:** *** : * * ***

AT5G49450.1     RIKENSERCRAVKQRLDSVETENAGLRSEKIWLSSYVSDLENMIATTSLTLTQSGGGDCV
pt035022_POPTR_ KIYEDNKKYAALWQRHFALESDNKVLTDEKLKLAEYLKNLQQVLA--SYNVIES------
                :* *:.::  *: **  ::*::*  * .**: *:.*:.:*::::*  * .: :*      

AT5G49450.1     DDQNANAGIAVGDCRRTPWKL--SCGSLQPMASFKT
pt035022_POPTR_ -DQD----LEVSDRFLNPWQVHGSVKSITASGMFKV
                 **:    : *.*   .**::  *  *: . . **.
BoxShade v3.31 C (beta, 970507) Output
AT5G49450.1     - - M A N A E K T S S G S D I - - - - - - - D E K K R K R K L S N R E S A R R S R L K K Q K L M E D T I H E I S S L E R
pt035022_POPTR_    M P P S F A K A G S S G S E I D P P N A M V D E K R R K R M I S N R E S A R R S R M K R Q K Y M E D L V T E K S I L E R
 
AT5G49450.1     R I K E N S E R C R A V K Q R L D S V E T E N A G L R S E K I W L S S Y V S D L E N M I A T T S L T L T Q S G G G D C V
pt035022_POPTR_    K I Y E D N K K Y A A L W Q R H F A L E S D N K V L T D E K L K L A E Y L K N L Q Q V L A - - S Y N V I E S - - - - - -
 
AT5G49450.1     D D Q N A N A G I A V G D C R R T P W K L - - S C G S L Q P M A S F K T
pt035022_POPTR_    - D Q D - - - - L E V S D R F L N P W Q V H G S V K S I T A S G M F K V
 
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