fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012761 not found in 329aa AT5G49620.1 1st_1st 0.444055944 Ia
Sb021634 not found in 485aa AT5G49620.1 1st_1st 0.437062937 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G49620.1     MGDKGRSLKINKNMEEFTKVEEEM---DVRRGPWTVEEDLELINYIASHGEGRWNSLARC
Os012761_Os03t0 ---------MDMAHERDASSEEEVMGGDLRRGPWTVEEDLLLVNYIAAHGEGRWNSLARS
Sb021634_Sorbi1 -----------MAHERDASSEEEVMAGELRRGPWTVEEDLLLVNYVAAHGEGRWNSLARS
                              *. :. ***:   ::*********** *:**:*:***********.

AT5G49620.1     AELKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNE
Os012761_Os03t0 AGLKRTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNE
Sb021634_Sorbi1 AGLKRTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNE
                * *******************:****** :*********:***********:********

AT5G49620.1     IKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASI-----GSVSMSSCV
Os012761_Os03t0 IKNYWRTRVQKHAKQLKCDVNSQQFKDVMRYLWMPRLVERIQAAAA-----GQQQQQEGG
Sb021634_Sorbi1 IKNYWRTRVQKHAKQLKCDVNSQQFKDVMRYLWMPRLVERIQAAAANASAGGAPPQPGAA
                ***************************.*:**************:      *        

AT5G49620.1     TTSS-----------DQ-----------------------FVINNNNTNNVDNLALMSNP
Os012761_Os03t0 TDTP-PLSWQHGGS-DGLYESPELPAPDASCWPAEYC---AAAGGAQSG--------GTP
Sb021634_Sorbi1 ADTPLSSSWQQGGADDGLYASPEELPTDACSWPPADCYYPAAVGDGDHHQ---LLMMNNP
                : :.           *                         . .. :          ..*

AT5G49620.1     NGYITPDNSSVAV---SPVSD--------------------LTECQVSSEVWKIGQDENL
Os012761_Os03t0 A----PELSSTTAGSSSLSTDSGAGAQPSW-PTQADGAEWFTTACDASSATGGV------
Sb021634_Sorbi1 A--VGPELSSTTAGSSSPSSDSGAGAQPCWLVAPVGGAEWFTTACDASSAV---------
                     *: **.:.   *  :*                     * *:.** .         

AT5G49620.1     VDPKMTSPNYMDNSSGLLNGDFTKMQDQSDLNWFENINGM----VPNYS-----------
Os012761_Os03t0 ---AMRDTELELAQPPCQGGQ----------TWTTSESSLPGLTFPDLAVADFEIGGFDV
Sb021634_Sorbi1 ----LAGQQQQQQQSSCLLGETT--------TWASSE-------LPELGVADFEIGSFDV
                    : . :    ..    *:          .*  .        .*: .           

AT5G49620.1     DSFWNIGNDEDFWLLQQHQQVHDNGSF
Os012761_Os03t0 DSFWTSMEDDQLWCPTQAAV-------
Sb021634_Sorbi1 ESIW-SM-DDNLWFTQAQGV-------
                :*:*    *:::*
BoxShade v3.31 C (beta, 970507) Output
AT5G49620.1     M G D K G R S L K I N K N M E E F T K V E E E M - - - D V R R G P W T V E E D L E L I N Y I A S H G E G R W N S L A R C
Os012761_Os03t0    - - - - - - - - - M D M A H E R D A S S E E E V M G G D L R R G P W T V E E D L L L V N Y I A A H G E G R W N S L A R S
Sb021634_Sorbi1    - - - - - - - - - - - M A H E R D A S S E E E V M A G E L R R G P W T V E E D L L L V N Y V A A H G E G R W N S L A R S
 
AT5G49620.1     A E L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H T R W G N R W S K I A Q Y L P G R T D N E
Os012761_Os03t0    A G L K R T G K S C R L R W L N Y L R P D L R R G N I T P Q E Q L L I L E L H S R W G N R W S K I A Q H L P G R T D N E
Sb021634_Sorbi1    A G L K R T G K S C R L R W L N Y L R P D L R R G N I T P Q E Q L L I L E L H S R W G N R W S K I A Q H L P G R T D N E
 
AT5G49620.1     I K N Y W R T R V Q K H A K Q L K C D V N S Q Q F K D T M K Y L W M P R L V E R I Q A A S I - - - - - G S V S M S S C V
Os012761_Os03t0    I K N Y W R T R V Q K H A K Q L K C D V N S Q Q F K D V M R Y L W M P R L V E R I Q A A A A - - - - - G Q Q Q Q Q E G G
Sb021634_Sorbi1    I K N Y W R T R V Q K H A K Q L K C D V N S Q Q F K D V M R Y L W M P R L V E R I Q A A A A N A S A G G A P P Q P G A A
 
AT5G49620.1     T T S S - - - - - - - - - - - D Q - - - - - - - - - - - - - - - - - - - - - - - F V I N N N N T N N V D N L A L M S N P
Os012761_Os03t0    T D T P - P L S W Q H G G S - D G L Y E S P E L P A P D A S C W P A E Y C - - - A A A G G A Q S G - - - - - - - - G T P
Sb021634_Sorbi1    A D T P L S S S W Q Q G G A D D G L Y A S P E E L P T D A C S W P P A D C Y Y P A A V G D G D H H Q - - - L L M M N N P
 
AT5G49620.1     N G Y I T P D N S S V A V - - - S P V S D - - - - - - - - - - - - - - - - - - - - L T E C Q V S S E V W K I G Q D E N L
Os012761_Os03t0    A - - - - P E L S S T T A G S S S L S T D S G A G A Q P S W - P T Q A D G A E W F T T A C D A S S A T G G V - - - - - -
Sb021634_Sorbi1    A - - V G P E L S S T T A G S S S P S S D S G A G A Q P C W L V A P V G G A E W F T T A C D A S S A V - - - - - - - - -
 
AT5G49620.1     V D P K M T S P N Y M D N S S G L L N G D F T K M Q D Q S D L N W F E N I N G M - - - - V P N Y S - - - - - - - - - - -
Os012761_Os03t0    - - - A M R D T E L E L A Q P P C Q G G Q - - - - - - - - - - T W T T S E S S L P G L T F P D L A V A D F E I G G F D V
Sb021634_Sorbi1    - - - - L A G Q Q Q Q Q Q Q S S C L L G E T T - - - - - - - - T W A S S E - - - - - - - L P E L G V A D F E I G S F D V
 
AT5G49620.1     D S F W N I G N D E D F W L L Q Q H Q Q V H D N G S F
Os012761_Os03t0    D S F W T S M E D D Q L W C P T Q A A V - - - - - - -
Sb021634_Sorbi1    E S I W - S M - D D N L W F T Q A Q G V - - - - - - -
 
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