fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042981 not found in 321aa AT3G06490.1 1st_not 0.480769230 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G49620.1     ---MGDKGRSLKINKNMEEFTKVEEEM--DVRRGPWTVEEDLELINYIASHGEGRWNSLA
pt042981_POPTR_ MLMMDVKGNS----NSSSSTTQSDEEMMGDLRRGPWTVEEDFKLINYIATHGEGRWNSLA
                   *. **.*    :. .. *: :***  *:**********::******:**********

AT5G49620.1     RCAELKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTD
pt042981_POPTR_ RCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLMILELHSRWGNRWSKIAQHLPGRTD
                *** *******************************:*****:***********:******

AT5G49620.1     NEIKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASIGSVSMSSCVTTS
pt042981_POPTR_ NEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAATATNTSSTSTAT
                ************************:******:**************:  :.. **  *::

AT5G49620.1     SDQFVINNNNTNNVD----NLALMSNPNGY-------------ITPDNSSVA--------
pt042981_POPTR_ VSAPATNQHSISNRDVGTGNLVMA--PHGINGNDFGVSHVTQSYTPENSSTAASSDSFAT
                 .  . *::. .* *    **.:   *:*               **:***.*        

AT5G49620.1     -VSPVSDLTECQVSSEVWKIGQDENLVDPKMTSPNY-----------MDNSSGLLNG--D
pt042981_POPTR_ QVSPVSDLT-----TDYYNIPVNRN------TNPDYFQAGQVGYSESMISPPGFFNHGLD
                 ********     :: ::*  :.*      *.*:*           * ...*::*   *

AT5G49620.1     FTKMQDQSDLNWFENINGMVP----NYSDSFWNIGNDEDFWLLQQHQQVHDNGSF
pt042981_POPTR_ FQAMEHSSN-QW--------PMDSGDTSDNMWNL---EDIWFLQ--QQLNNL---
                *  *:..*: :*        *    : **.:**:   **:*:**  **:::
BoxShade v3.31 C (beta, 970507) Output
AT5G49620.1     - - - M G D K G R S L K I N K N M E E F T K V E E E M - - D V R R G P W T V E E D L E L I N Y I A S H G E G R W N S L A
pt042981_POPTR_    M L M M D V K G N S - - - - N S S S S T T Q S D E E M M G D L R R G P W T V E E D F K L I N Y I A T H G E G R W N S L A
 
AT5G49620.1     R C A E L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H T R W G N R W S K I A Q Y L P G R T D
pt042981_POPTR_    R C A G L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L M I L E L H S R W G N R W S K I A Q H L P G R T D
 
AT5G49620.1     N E I K N Y W R T R V Q K H A K Q L K C D V N S Q Q F K D T M K Y L W M P R L V E R I Q A A S I G S V S M S S C V T T S
pt042981_POPTR_    N E I K N Y W R T R V Q K H A K Q L K C D V N S K Q F K D T M R Y L W M P R L V E R I Q A A A A T A T N T S S T S T A T
 
AT5G49620.1     S D Q F V I N N N N T N N V D - - - - N L A L M S N P N G Y - - - - - - - - - - - - - I T P D N S S V A - - - - - - - -
pt042981_POPTR_    V S A P A T N Q H S I S N R D V G T G N L V M A - - P H G I N G N D F G V S H V T Q S Y T P E N S S T A A S S D S F A T
 
AT5G49620.1     - V S P V S D L T E C Q V S S E V W K I G Q D E N L V D P K M T S P N Y - - - - - - - - - - - M D N S S G L L N G - - D
pt042981_POPTR_    Q V S P V S D L T - - - - - T D Y Y N I P V N R N - - - - - - T N P D Y F Q A G Q V G Y S E S M I S P P G F F N H G L D
 
AT5G49620.1     F T K M Q D Q S D L N W F E N I N G M V P - - - - N Y S D S F W N I G N D E D F W L L Q Q H Q Q V H D N G S F
pt042981_POPTR_    F Q A M E H S S N - Q W - - - - - - - - P M D S G D T S D N M W N L - - - E D I W F L Q - - Q Q L N N L - - -
 
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