fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034806 not found in 317aa AT3G06490.1 not_not 0.470279720 III
Pt040360 not found in 294aa AT3G06490.1 not_not 0.405594405 III
Pt016907 not found in 287aa AT3G06490.1 not_not 0.403846153 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G49620.1     -MGDKGRSLKINKNMEEFTKVEEEM--DVRRGPWTVEEDLELINYIASHGEGRWNSLARC
pt016907_POPTR_ -MDARVRK----HGLAST--EDQDM--GTRKGPWTVEEDSLLAHYITNHGEGQWNTAARC
pt034806_POPTR_ MMDVEGNS----NSSSSTTQSDEEMMVDLRRGPWTVEEDFKLIDYIATHGEGRWNSLARC
pt040360_POPTR_ -MDAQARK----HGYAGTLSEDQGM--GIRKGPWTIEEDSLLAHYITIHGEGHWNSAARC
                 *. . ..    :.       :: *  . *:****:***  * .**: ****:**: ***

AT5G49620.1     AELKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNE
pt016907_POPTR_ AGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILQLHSHWGNRWSKIAQQLPGRTDNE
pt034806_POPTR_ AGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLMILELHSRWGNRWSKIAQHLPGRTDNE
pt040360_POPTR_ AGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILQLHSRWGNRWSKIAQMLPGRTDNE
                * ******************:********:***:**:**::********** ********

AT5G49620.1     IKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASIG---SVSMSSCVTT
pt016907_POPTR_ IKNYWRTRVQKQAKQLKCDVNSKQFRDTMRYAWIPRLIERIQAESES-PVDQPIISTPTY
pt034806_POPTR_ IKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLIERIQAAAAATSSSTATSASPAA
pt040360_POPTR_ IKNYWRTRVQKQAKQLKCDVNSKQFRDTMRYVWIPQLIQKIGAESES-PMDQPTISPPTY
                ***********:**********:**:***:* *:*:*:::* * : .   . .  :  : 

AT5G49620.1     SSDQFVINNNNTNNVDNLALMSNPNGYI-------------TPDNSSVA---------VS
pt016907_POPTR_ HSSQIDIPVAASESGSDLIG---PN---------------FMPDISGSCTYSDSLDAQVS
pt034806_POPTR_ STNHHLINNNDVGT-GNLVM---PHGVIGNDFGVSHVTPSYTPENSSTAASSDSFAAQVS
pt040360_POPTR_ YSSQIDIPAAASESGSDLID---PN---------------FMPDISVSSTLSDSLDAQVS
                 :.:  *      . .:*     *:                 *: *  .         **

AT5G49620.1     PVSDLTECQVSSEVWKIGQDENLVDPKMTSPNY-----------MDNSSGLLNG------
pt016907_POPTR_ SGSDLTNSQ---------------NP--PCSHY-----------MQNGACSYPENDSVSW
pt034806_POPTR_ PVSDLT-----TDYYYIPVNHN------PNPDYFQADQGGYSESMISPAGYFNQ------
pt040360_POPTR_ PWSDLTDYQ---------------NP--PCGQY-------YSDCMQNGSGLCPENDSGSW
                . ****                      .  .*           * . :           

AT5G49620.1     -------DFTKMQDQSDLNWFENINGMVPNYS-DSFWNIGNDEDFWLLQQHQQVHDNGSF
pt016907_POPTR_ DWDQHGVDMQGMEQG---RYGLTGGG---DTM-ENLW---SEENIWFLH--HQLM-----
pt034806_POPTR_ -----GLDFQAMEHNSN-QWLMESG----DTS-DNLW---NPEDIWFLQ--QQMNYNM--
pt040360_POPTR_ GWCQDGVDMQGMEQE---RYGFIGGG---DSLDQSLW---NEENIWFLQ--QQLM-----
                       *:  *:.    .:    .    :   :.:*   . *::*:*:  :*:
BoxShade v3.31 C (beta, 970507) Output
AT5G49620.1     - M G D K G R S L K I N K N M E E F T K V E E E M - - D V R R G P W T V E E D L E L I N Y I A S H G E G R W N S L A R C
pt016907_POPTR_    - M D A R V R K - - - - H G L A S T - - E D Q D M - - G T R K G P W T V E E D S L L A H Y I T N H G E G Q W N T A A R C
pt034806_POPTR_    M M D V E G N S - - - - N S S S S T T Q S D E E M M V D L R R G P W T V E E D F K L I D Y I A T H G E G R W N S L A R C
pt040360_POPTR_    - M D A Q A R K - - - - H G Y A G T L S E D Q G M - - G I R K G P W T I E E D S L L A H Y I T I H G E G H W N S A A R C
 
AT5G49620.1     A E L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H T R W G N R W S K I A Q Y L P G R T D N E
pt016907_POPTR_    A G L K R T G K S C R L R W L N Y L R P N V R R G N I T L Q E Q L L I L Q L H S H W G N R W S K I A Q Q L P G R T D N E
pt034806_POPTR_    A G L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L M I L E L H S R W G N R W S K I A Q H L P G R T D N E
pt040360_POPTR_    A G L K R T G K S C R L R W L N Y L R P N V R R G N I T L Q E Q L L I L Q L H S R W G N R W S K I A Q M L P G R T D N E
 
AT5G49620.1     I K N Y W R T R V Q K H A K Q L K C D V N S Q Q F K D T M K Y L W M P R L V E R I Q A A S I G - - - S V S M S S C V T T
pt016907_POPTR_    I K N Y W R T R V Q K Q A K Q L K C D V N S K Q F R D T M R Y A W I P R L I E R I Q A E S E S - P V D Q P I I S T P T Y
pt034806_POPTR_    I K N Y W R T R V Q K H A K Q L K C D V N S K Q F K D T M R Y L W M P R L I E R I Q A A A A A T S S S T A T S A S P A A
pt040360_POPTR_    I K N Y W R T R V Q K Q A K Q L K C D V N S K Q F R D T M R Y V W I P Q L I Q K I G A E S E S - P M D Q P T I S P P T Y
 
AT5G49620.1     S S D Q F V I N N N N T N N V D N L A L M S N P N G Y I - - - - - - - - - - - - - T P D N S S V A - - - - - - - - - V S
pt016907_POPTR_    H S S Q I D I P V A A S E S G S D L I G - - - P N - - - - - - - - - - - - - - - F M P D I S G S C T Y S D S L D A Q V S
pt034806_POPTR_    S T N H H L I N N N D V G T - G N L V M - - - P H G V I G N D F G V S H V T P S Y T P E N S S T A A S S D S F A A Q V S
pt040360_POPTR_    Y S S Q I D I P A A A S E S G S D L I D - - - P N - - - - - - - - - - - - - - - F M P D I S V S S T L S D S L D A Q V S
 
AT5G49620.1     P V S D L T E C Q V S S E V W K I G Q D E N L V D P K M T S P N Y - - - - - - - - - - - M D N S S G L L N G - - - - - -
pt016907_POPTR_    S G S D L T N S Q - - - - - - - - - - - - - - - N P - - P C S H Y - - - - - - - - - - - M Q N G A C S Y P E N D S V S W
pt034806_POPTR_    P V S D L T - - - - - T D Y Y Y I P V N H N - - - - - - P N P D Y F Q A D Q G G Y S E S M I S P A G Y F N Q - - - - - -
pt040360_POPTR_    P W S D L T D Y Q - - - - - - - - - - - - - - - N P - - P C G Q Y - - - - - - - Y S D C M Q N G S G L C P E N D S G S W
 
AT5G49620.1     - - - - - - - D F T K M Q D Q S D L N W F E N I N G M V P N Y S - D S F W N I G N D E D F W L L Q Q H Q Q V H D N G S F
pt016907_POPTR_    D W D Q H G V D M Q G M E Q G - - - R Y G L T G G G - - - D T M - E N L W - - - S E E N I W F L H - - H Q L M - - - - -
pt034806_POPTR_    - - - - - G L D F Q A M E H N S N - Q W L M E S G - - - - D T S - D N L W - - - N P E D I W F L Q - - Q Q M N Y N M - -
pt040360_POPTR_    G W C Q D G V D M Q G M E Q E - - - R Y G F I G G G - - - D S L D Q S L W - - - N E E N I W F L Q - - Q Q L M - - - - -
 
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