fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042981 not found in 321aa AT3G06490.1 1st_not 0.480769230 II
Pt034806 not found in 317aa AT3G06490.1 not_not 0.470279720 III
Pt040360 not found in 294aa AT3G06490.1 not_not 0.405594405 III
Pt016907 not found in 287aa AT3G06490.1 not_not 0.403846153 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G49620.1     ---MGDKGRSLKINKNMEEFTKVEEEM--DVRRGPWTVEEDLELINYIASHGEGRWNSLA
pt040360_POPTR_ ---MDAQARK----HGYAGTLSEDQGM--GIRKGPWTIEEDSLLAHYITIHGEGHWNSAA
pt034806_POPTR_ --MMDVEGNS----NSSSSTTQSDEEMMVDLRRGPWTVEEDFKLIDYIATHGEGRWNSLA
pt042981_POPTR_ MLMMDVKGNS----NSSSSTTQSDEEMMGDLRRGPWTVEEDFKLINYIATHGEGRWNSLA
pt016907_POPTR_ ---MDARVRK----HGLAST--EDQDM--GTRKGPWTVEEDSLLAHYITNHGEGQWNTAA
                   *. . ..    :.       :: *  . *:****:***  * .**: ****:**: *

AT5G49620.1     RCAELKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTD
pt040360_POPTR_ RCAGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILQLHSRWGNRWSKIAQMLPGRTD
pt034806_POPTR_ RCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLMILELHSRWGNRWSKIAQHLPGRTD
pt042981_POPTR_ RCAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLMILELHSRWGNRWSKIAQHLPGRTD
pt016907_POPTR_ RCAGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILQLHSHWGNRWSKIAQQLPGRTD
                *** ******************:********:***:**:**::********** ******

AT5G49620.1     NEIKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASIGS--VSMSSCVT
pt040360_POPTR_ NEIKNYWRTRVQKQAKQLKCDVNSKQFRDTMRYVWIPQLIQKIGAESESPMDQPTISPPT
pt034806_POPTR_ NEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLIERIQAAAA----ATSSSTAT
pt042981_POPTR_ NEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAATATNTSSTSTAT
pt016907_POPTR_ NEIKNYWRTRVQKQAKQLKCDVNSKQFRDTMRYAWIPRLIERIQAESESPVDQPIISTPT
                *************:**********:**:***:* *:*:*:::* * :      .  *  *

AT5G49620.1     TSSDQFVINNNNTNNVD----NLALMSNPNGYI-------------TPDNSSVA------
pt040360_POPTR_ YYSSQ----------IDI----------PAAAS--ESGSDLIDPNFMPDISVSSTLSDSL
pt034806_POPTR_ SASPAASTNHHLINNNDVGTGNLVM---PHGVIGNDFGVSHVTPSYTPENSSTAASSDSF
pt042981_POPTR_ VSAPA--TNQHSISNRDVGTGNLVMA--PHGINGNDFGVSHVTQSYTPENSSTAASSDSF
pt016907_POPTR_ YHSSQ----------IDI----------PVAAS--ESGSDLIGPNFMPDISGSCTYSDSL
                  :             *           * .                *: *  .      

AT5G49620.1     ---VSPVSDLTECQVSSEVWKIGQDENLVDPKMTSPNY---------------MDNSSGL
pt040360_POPTR_ DAQVSPWSDLTDYQ------------N---P--PCGQYYSDCMQNGSGLCPENDSGSWGW
pt034806_POPTR_ AAQVSPVSDLT-----TDYYYIPVNHN------PNPDY----FQADQGGYSESMISPAGY
pt042981_POPTR_ ATQVSPVSDLT-----TDYYNIPVNRN------TNPDY----FQAGQVGYSESMISPPGF
pt016907_POPTR_ DAQVSSGSDLTNSQ------------N---P--PCSHY----MQNGACSYPENDSVSWDW
                   **. ****               *      .  .*                  . . 

AT5G49620.1     LNG--DFTKMQDQSDLNWFENINGMVPNYS-DSFWNIGNDEDFWLLQQHQQVHDNGSF
pt040360_POPTR_ CQDGVDMQGMEQE---RYGFIGGG---DSLDQSLWNE---ENIWFLQ--QQLM-----
pt034806_POPTR_ FNQGLDFQAMEHNSN-QWLMESG----DTS-DNLWNP---EDIWFLQ--QQMNYNM--
pt042981_POPTR_ FNHGLDFQAMEHSSN-QWPMDSG----DTS-DNMWNL---EDIWFLQ--QQLN-NL--
pt016907_POPTR_ DQHGVDMQGMEQG---RYGLTGGG---DTM-ENLWSE---ENIWFLH--HQLM-----
                 :   *:  *:.    .:    .    :   :.:*.    *::*:*:  :*:
BoxShade v3.31 C (beta, 970507) Output
AT5G49620.1     - - - M G D K G R S L K I N K N M E E F T K V E E E M - - D V R R G P W T V E E D L E L I N Y I A S H G E G R W N S L A
pt040360_POPTR_    - - - M D A Q A R K - - - - H G Y A G T L S E D Q G M - - G I R K G P W T I E E D S L L A H Y I T I H G E G H W N S A A
pt034806_POPTR_    - - M M D V E G N S - - - - N S S S S T T Q S D E E M M V D L R R G P W T V E E D F K L I D Y I A T H G E G R W N S L A
pt042981_POPTR_    M L M M D V K G N S - - - - N S S S S T T Q S D E E M M G D L R R G P W T V E E D F K L I N Y I A T H G E G R W N S L A
pt016907_POPTR_    - - - M D A R V R K - - - - H G L A S T - - E D Q D M - - G T R K G P W T V E E D S L L A H Y I T N H G E G Q W N T A A
 
AT5G49620.1     R C A E L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H T R W G N R W S K I A Q Y L P G R T D
pt040360_POPTR_    R C A G L K R T G K S C R L R W L N Y L R P N V R R G N I T L Q E Q L L I L Q L H S R W G N R W S K I A Q M L P G R T D
pt034806_POPTR_    R C A G L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L M I L E L H S R W G N R W S K I A Q H L P G R T D
pt042981_POPTR_    R C A G L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L M I L E L H S R W G N R W S K I A Q H L P G R T D
pt016907_POPTR_    R C A G L K R T G K S C R L R W L N Y L R P N V R R G N I T L Q E Q L L I L Q L H S H W G N R W S K I A Q Q L P G R T D
 
AT5G49620.1     N E I K N Y W R T R V Q K H A K Q L K C D V N S Q Q F K D T M K Y L W M P R L V E R I Q A A S I G S - - V S M S S C V T
pt040360_POPTR_    N E I K N Y W R T R V Q K Q A K Q L K C D V N S K Q F R D T M R Y V W I P Q L I Q K I G A E S E S P M D Q P T I S P P T
pt034806_POPTR_    N E I K N Y W R T R V Q K H A K Q L K C D V N S K Q F K D T M R Y L W M P R L I E R I Q A A A A - - - - A T S S S T A T
pt042981_POPTR_    N E I K N Y W R T R V Q K H A K Q L K C D V N S K Q F K D T M R Y L W M P R L V E R I Q A A A A T A T N T S S T S T A T
pt016907_POPTR_    N E I K N Y W R T R V Q K Q A K Q L K C D V N S K Q F R D T M R Y A W I P R L I E R I Q A E S E S P V D Q P I I S T P T
 
AT5G49620.1     T S S D Q F V I N N N N T N N V D - - - - N L A L M S N P N G Y I - - - - - - - - - - - - - T P D N S S V A - - - - - -
pt040360_POPTR_    Y Y S S Q - - - - - - - - - - I D I - - - - - - - - - - P A A A S - - E S G S D L I D P N F M P D I S V S S T L S D S L
pt034806_POPTR_    S A S P A A S T N H H L I N N N D V G T G N L V M - - - P H G V I G N D F G V S H V T P S Y T P E N S S T A A S S D S F
pt042981_POPTR_    V S A P A - - T N Q H S I S N R D V G T G N L V M A - - P H G I N G N D F G V S H V T Q S Y T P E N S S T A A S S D S F
pt016907_POPTR_    Y H S S Q - - - - - - - - - - I D I - - - - - - - - - - P V A A S - - E S G S D L I G P N F M P D I S G S C T Y S D S L
 
AT5G49620.1     - - - V S P V S D L T E C Q V S S E V W K I G Q D E N L V D P K M T S P N Y - - - - - - - - - - - - - - - M D N S S G L
pt040360_POPTR_    D A Q V S P W S D L T D Y Q - - - - - - - - - - - - N - - - P - - P C G Q Y Y S D C M Q N G S G L C P E N D S G S W G W
pt034806_POPTR_    A A Q V S P V S D L T - - - - - T D Y Y Y I P V N H N - - - - - - P N P D Y - - - - F Q A D Q G G Y S E S M I S P A G Y
pt042981_POPTR_    A T Q V S P V S D L T - - - - - T D Y Y N I P V N R N - - - - - - T N P D Y - - - - F Q A G Q V G Y S E S M I S P P G F
pt016907_POPTR_    D A Q V S S G S D L T N S Q - - - - - - - - - - - - N - - - P - - P C S H Y - - - - M Q N G A C S Y P E N D S V S W D W
 
AT5G49620.1     L N G - - D F T K M Q D Q S D L N W F E N I N G M V P N Y S - D S F W N I G N D E D F W L L Q Q H Q Q V H D N G S F
pt040360_POPTR_    C Q D G V D M Q G M E Q E - - - R Y G F I G G G - - - D S L D Q S L W N E - - - E N I W F L Q - - Q Q L M - - - - -
pt034806_POPTR_    F N Q G L D F Q A M E H N S N - Q W L M E S G - - - - D T S - D N L W N P - - - E D I W F L Q - - Q Q M N Y N M - -
pt042981_POPTR_    F N H G L D F Q A M E H S S N - Q W P M D S G - - - - D T S - D N M W N L - - - E D I W F L Q - - Q Q L N - N L - -
pt016907_POPTR_    D Q H G V D M Q G M E Q G - - - R Y G L T G G G - - - D T M - E N L W S E - - - E N I W F L H - - H Q L M - - - - -
 
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