fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os029691 not found in 300aa AT5G49620.1 not_1st 0.424825174 II
Os039545 not found in 285aa AT5G49620.1 not_1st 0.423076923 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G49620.1     MGDKGRSLKINKNMEEFTKVEEEM--------DVRRGPWTVEEDLELINYIASHGEGRWN
Os039545_Os11t0 -----MEMVLQRTSHHPVPGEQQEAAAELSSAELRRGPWTVDEDLTLINYISDHGEGRWN
Os029691_Os07t0 -------MMMARE----VSSEEEAGGGD----ELRRGPWTVEEDLLLVNYIAAHGEGRWN
                       : : :     .  *::         ::*******:*** *:***: *******

AT5G49620.1     SLARCAELKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPG
Os039545_Os11t0 ALARAAGLKRTGKSCRLRWLNYLRPDVKRGNFTAEEQLLILDLHSRWGNRWSKIAQHLPG
Os029691_Os07t0 ALARCAGLKRTGKSCRLRWLNYLRPDVRRGNMTAEEQLLILELHGRWGNRWSKIAQHLPG
                :***.* ********************:***:* *******:** ***********:***

AT5G49620.1     RTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASIG--------
Os039545_Os11t0 RTDNEIKNYWRTRVQKHAKQLNCDVNSKRFKDAMKYLWMPRLAERIHARAGAVDDSGDYS
Os029691_Os07t0 RTDNEIKNYWRTRVQKHAKHLNCDVNSQQFKDLMRYLWMPRLLERIHRSSQS--QSHDAD
                *******************:*:*****::*** *:******* ***:  : .        

AT5G49620.1     --SVSMSSCVTTSSDQFVINNNNTNNVDNLALMSNPNGYITPDNSSVAVSPVSDLTECQV
Os039545_Os11t0 NNDLSCVSGVTMATVANCFDG----------------------SPSMVTSSSSD------
Os029691_Os07t0 DADLSVSAATSCITSDLVVDAH---------------------HPPLAMADSND------
                  .:*  : .:  :    .:                        ..:. :  .*      

AT5G49620.1     S-SEVWKIGQDENL----VDPKMTSPNYMDNS------SGLLNGDF---TKMQDQSDLN-
Os039545_Os11t0 SFTSESQDLKKINLHVHGDDEKMNSEDWMQEVDHEFWSTEIQPNN----EQFQDQQLNG-
Os029691_Os07t0 S-AAMWQQHQAPQMSVAGAPPPTTT--MAQHV--------VLPTAAASCHQMQDQFVCAR
                * :   :  :  ::         .:    :.         :         ::***     

AT5G49620.1     --------WFENIN--GMV-----------PNYS-DS--FWNIGNDEDFWLLQQHQQVHD
Os039545_Os11t0 --------WVQGFS-EGLS----------------ET--LW--SLE-DIWKMQ-------
Os029691_Os07t0 AAETTTCCWSESESLPGLAGLYYDDAAAALPEFDVETMAMW--GPEDDPWYTQMLGL---
                        * :. .  *:                 ::  :*  . : * *  *       

AT5G49620.1     NGSF
Os039545_Os11t0 ----
Os029691_Os07t0 ----
BoxShade v3.31 C (beta, 970507) Output
AT5G49620.1     M G D K G R S L K I N K N M E E F T K V E E E M - - - - - - - - D V R R G P W T V E E D L E L I N Y I A S H G E G R W N
Os039545_Os11t0    - - - - - M E M V L Q R T S H H P V P G E Q Q E A A A E L S S A E L R R G P W T V D E D L T L I N Y I S D H G E G R W N
Os029691_Os07t0    - - - - - - - M M M A R E - - - - V S S E E E A G G G D - - - - E L R R G P W T V E E D L L L V N Y I A A H G E G R W N
 
AT5G49620.1     S L A R C A E L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H T R W G N R W S K I A Q Y L P G
Os039545_Os11t0    A L A R A A G L K R T G K S C R L R W L N Y L R P D V K R G N F T A E E Q L L I L D L H S R W G N R W S K I A Q H L P G
Os029691_Os07t0    A L A R C A G L K R T G K S C R L R W L N Y L R P D V R R G N M T A E E Q L L I L E L H G R W G N R W S K I A Q H L P G
 
AT5G49620.1     R T D N E I K N Y W R T R V Q K H A K Q L K C D V N S Q Q F K D T M K Y L W M P R L V E R I Q A A S I G - - - - - - - -
Os039545_Os11t0    R T D N E I K N Y W R T R V Q K H A K Q L N C D V N S K R F K D A M K Y L W M P R L A E R I H A R A G A V D D S G D Y S
Os029691_Os07t0    R T D N E I K N Y W R T R V Q K H A K H L N C D V N S Q Q F K D L M R Y L W M P R L L E R I H R S S Q S - - Q S H D A D
 
AT5G49620.1     - - S V S M S S C V T T S S D Q F V I N N N N T N N V D N L A L M S N P N G Y I T P D N S S V A V S P V S D L T E C Q V
Os039545_Os11t0    N N D L S C V S G V T M A T V A N C F D G - - - - - - - - - - - - - - - - - - - - - - S P S M V T S S S S D - - - - - -
Os029691_Os07t0    D A D L S V S A A T S C I T S D L V V D A H - - - - - - - - - - - - - - - - - - - - - H P P L A M A D S N D - - - - - -
 
AT5G49620.1     S - S E V W K I G Q D E N L - - - - V D P K M T S P N Y M D N S - - - - - - S G L L N G D F - - - T K M Q D Q S D L N -
Os039545_Os11t0    S F T S E S Q D L K K I N L H V H G D D E K M N S E D W M Q E V D H E F W S T E I Q P N N - - - - E Q F Q D Q Q L N G -
Os029691_Os07t0    S - A A M W Q Q H Q A P Q M S V A G A P P P T T T - - M A Q H V - - - - - - - - V L P T A A A S C H Q M Q D Q F V C A R
 
AT5G49620.1     - - - - - - - - W F E N I N - - G M V - - - - - - - - - - - P N Y S - D S - - F W N I G N D E D F W L L Q Q H Q Q V H D
Os039545_Os11t0    - - - - - - - - W V Q G F S - E G L S - - - - - - - - - - - - - - - - E T - - L W - - S L E - D I W K M Q - - - - - - -
Os029691_Os07t0    A A E T T T C C W S E S E S L P G L A G L Y Y D D A A A A L P E F D V E T M A M W - - G P E D D P W Y T Q M L G L - - -
 
AT5G49620.1     N G S F
Os039545_Os11t0    - - - -
Os029691_Os07t0    - - - -
 
0