fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os001601 not found in 293aa AT3G06490.1 not_not 0.405594405 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G49620.1     MGDKGRSLKINKNMEEFTKVEEEMDVRRGPWTVEEDLELINYIASHGEGRWNSLARCAEL
Os001601_Os01t0 -----MDAPCGWTTSAAAAVAEEEDVRRGPWTVEEDAVLAGYVAANGEGRWNELARAAGL
                      .   . . .  : * ** ************  * .*:*::******.***.* *

AT5G49620.1     KRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKN
Os001601_Os01t0 RRTGKSCRLRWLNYLRPDVRRGDFTPQEQLLILELHFRWGNRWSRIAQHMPGRTDNEIKN
                :*********************::* :********* *******:***::**********

AT5G49620.1     YWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASIGS---------------
Os001601_Os01t0 YWRTRVQKHAKQLGCDVNSRQFKDVMRHLWMPRLVERIHAAAASSERAAPPPCAAAPASH
                ************* *****:****.*::**********:**: .*               

AT5G49620.1     -------------VSMSSCVTTSSDQFVINNNNTNNVDNLALM-----------SNPNGY
Os001601_Os01t0 SGMCHSPDPSTTTSSMAGSSVTHGEQFPSSTNH-----HLMTMASVTTAAADWSSEQCGS
                              **:.. .* .:**  ..*:     :*  *           *:  * 

AT5G49620.1     ITPDNSSVAVSPVSDLTECQVSSEVWKIGQDENLVDPKMTSPNYMDNSSGLLNGDFTKMQ
Os001601_Os01t0 GSATSTSVGIS--YDMFEGSWSELLARAYDD--------------DGADSSLLPDF-QMA
                 :. .:**.:*   *: * . *. : :  :*              *.:.. *  ** :* 

AT5G49620.1     DQSDLNWFENINGMVPNYSDSFWNIGNDEDFWLLQQHQQVHDNGSF
Os001601_Os01t0 DTGDNCWWSNL-----------------EDIWSQQPY---------
                * .*  *:.*:                 **:*  * :
BoxShade v3.31 C (beta, 970507) Output
AT5G49620.1     M G D K G R S L K I N K N M E E F T K V E E E M D V R R G P W T V E E D L E L I N Y I A S H G E G R W N S L A R C A E L
Os001601_Os01t0    - - - - - M D A P C G W T T S A A A A V A E E E D V R R G P W T V E E D A V L A G Y V A A N G E G R W N E L A R A A G L
 
AT5G49620.1     K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H T R W G N R W S K I A Q Y L P G R T D N E I K N
Os001601_Os01t0    R R T G K S C R L R W L N Y L R P D V R R G D F T P Q E Q L L I L E L H F R W G N R W S R I A Q H M P G R T D N E I K N
 
AT5G49620.1     Y W R T R V Q K H A K Q L K C D V N S Q Q F K D T M K Y L W M P R L V E R I Q A A S I G S - - - - - - - - - - - - - - -
Os001601_Os01t0    Y W R T R V Q K H A K Q L G C D V N S R Q F K D V M R H L W M P R L V E R I H A A A A S S E R A A P P P C A A A P A S H
 
AT5G49620.1     - - - - - - - - - - - - - V S M S S C V T T S S D Q F V I N N N N T N N V D N L A L M - - - - - - - - - - - S N P N G Y
Os001601_Os01t0    S G M C H S P D P S T T T S S M A G S S V T H G E Q F P S S T N H - - - - - H L M T M A S V T T A A A D W S S E Q C G S
 
AT5G49620.1     I T P D N S S V A V S P V S D L T E C Q V S S E V W K I G Q D E N L V D P K M T S P N Y M D N S S G L L N G D F T K M Q
Os001601_Os01t0    G S A T S T S V G I S - - Y D M F E G S W S E L L A R A Y D D - - - - - - - - - - - - - - D G A D S S L L P D F - Q M A
 
AT5G49620.1     D Q S D L N W F E N I N G M V P N Y S D S F W N I G N D E D F W L L Q Q H Q Q V H D N G S F
Os001601_Os01t0    D T G D N C W W S N L - - - - - - - - - - - - - - - - - E D I W S Q Q P Y - - - - - - - - -
 
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