fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021634 not found in 485aa AT5G49620.1 1st_1st 0.437062937 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G49620.1     MGDKGRSLKINKNMEEFTKVEEEM---DVRRGPWTVEEDLELINYIASHGEGRWNSLARC
Sb021634_Sorbi1 -----------MAHERDASSEEEVMAGELRRGPWTVEEDLLLVNYVAAHGEGRWNSLARS
                              *. :. ***:   ::*********** *:**:*:***********.

AT5G49620.1     AELKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNE
Sb021634_Sorbi1 AGLKRTGKSCRLRWLNYLRPDLRRGNITPQEQLLILELHSRWGNRWSKIAQHLPGRTDNE
                * *******************:****** :*********:***********:********

AT5G49620.1     IKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRLVERIQAASIGS------------
Sb021634_Sorbi1 IKNYWRTRVQKHAKQLKCDVNSQQFKDVMRYLWMPRLVERIQAAAANASAGGAPPQPGAA
                ***************************.*:**************: .:            

AT5G49620.1     ------------------------VSMSSCVTTSSDQFVINNNNTNNVDNLALMSNPNGY
Sb021634_Sorbi1 ADTPLSSSWQQGGADDGLYASPEELPTDACSWPPADCYYPAAVGDGDHHQLLMMNNPA--
                                        :. .:*  ..:* :     . .: .:* :*.**   

AT5G49620.1     ITPDNSSVAV---SPVSDLTECQVSSEVWKIGQDENLVDPKMTSPNYM---DNSSGLLNG
Sb021634_Sorbi1 VGPELSSTTAGSSSPSSD--SGAGAQPCW-------LVAPVGGAEWFTTACDASSAVLAG
                : *: **.:.   ** **  .   :.  *       ** *   :  :    * **.:* *

AT5G49620.1     DFTKMQDQSDL-----NWFENINGMVPNYS-----------DSFWNIGNDEDFWLLQQHQ
Sb021634_Sorbi1 QQQQQQQSSCLLGETTTW---ASSELPELGVADFEIGSFDVESIWSM--DDNLWFTQA-Q
                :  : *:.* *     .*    .. :*: .           :*:*.:  *:::*: *  *

AT5G49620.1     QVHDNGSF
Sb021634_Sorbi1 GV------
                 *
BoxShade v3.31 C (beta, 970507) Output
AT5G49620.1     M G D K G R S L K I N K N M E E F T K V E E E M - - - D V R R G P W T V E E D L E L I N Y I A S H G E G R W N S L A R C
Sb021634_Sorbi1    - - - - - - - - - - - M A H E R D A S S E E E V M A G E L R R G P W T V E E D L L L V N Y V A A H G E G R W N S L A R S
 
AT5G49620.1     A E L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H T R W G N R W S K I A Q Y L P G R T D N E
Sb021634_Sorbi1    A G L K R T G K S C R L R W L N Y L R P D L R R G N I T P Q E Q L L I L E L H S R W G N R W S K I A Q H L P G R T D N E
 
AT5G49620.1     I K N Y W R T R V Q K H A K Q L K C D V N S Q Q F K D T M K Y L W M P R L V E R I Q A A S I G S - - - - - - - - - - - -
Sb021634_Sorbi1    I K N Y W R T R V Q K H A K Q L K C D V N S Q Q F K D V M R Y L W M P R L V E R I Q A A A A N A S A G G A P P Q P G A A
 
AT5G49620.1     - - - - - - - - - - - - - - - - - - - - - - - - V S M S S C V T T S S D Q F V I N N N N T N N V D N L A L M S N P N G Y
Sb021634_Sorbi1    A D T P L S S S W Q Q G G A D D G L Y A S P E E L P T D A C S W P P A D C Y Y P A A V G D G D H H Q L L M M N N P A - -
 
AT5G49620.1     I T P D N S S V A V - - - S P V S D L T E C Q V S S E V W K I G Q D E N L V D P K M T S P N Y M - - - D N S S G L L N G
Sb021634_Sorbi1    V G P E L S S T T A G S S S P S S D - - S G A G A Q P C W - - - - - - - L V A P V G G A E W F T T A C D A S S A V L A G
 
AT5G49620.1     D F T K M Q D Q S D L - - - - - N W F E N I N G M V P N Y S - - - - - - - - - - - D S F W N I G N D E D F W L L Q Q H Q
Sb021634_Sorbi1    Q Q Q Q Q Q Q S S C L L G E T T T W - - - A S S E L P E L G V A D F E I G S F D V E S I W S M - - D D N L W F T Q A - Q
 
AT5G49620.1     Q V H D N G S F
Sb021634_Sorbi1    G V - - - - - -
 
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