fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002710 not found in 306aa AT5G49700.1 not_1st 0.633766233 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G49700.1     --MKGEY--REQKSNE----MFSKL-PHHQQQQQQQQQQHSLTSHFHLS-----------
pt002710_POPTR_ MNMKGEYVERHQAKHENTPNMFSELNPHHQHL--------PFSQHFQLSRESEEEDTRST
                  *****  *.* .:*    ***:* ****:         .::.**:**           

AT5G49700.1     -STVTPT----------------VDDSSIEVVRRPRGRPPGSKNKPKPPVFVTRDTDPPM
pt002710_POPTR_ GAATTPNPIPTSQKLNELNSSGGTDGATIEVVRRPRGRPPGSKNKPKPPVIITREPEPAM
                 ::.**.                .*.::**********************::**:.:*.*

AT5G49700.1     SPYILEVPSGNDVVEAINRFCRRKSIGVCVLSGSGSVANVTLRQPSPAALGSTITFHGKF
pt002710_POPTR_ SPYILEVPGGNDVVEALSRFCRRKNMGICVLTGTGTVANVTLRQPSTTP-GSTITFHGRF
                ********.*******:.******.:*:***:*:*:**********.:. ********:*

AT5G49700.1     DLLSVSATFLPPPPRTSLSPPVSNFFTVSLAGPQGQIIGGFVAGPLISAGTVYVIAASFN
pt002710_POPTR_ DILSISATFLP----QTTSYPLPNSFTISLAGPQGQIVGGIVAGGLVAAGTVFVVAASFN
                *:**:******     : * *:.* **:*********:**:*** *::****:*:*****

AT5G49700.1     NPSYHRLPAEEEQKHS-AGTGEREGQSPPVSGGGEESGQMA---GSGGESCGVSMYSCHM
pt002710_POPTR_ NPSYHRLQVEEEGRNSGSGGGGGEGRSPVSGAGGGESGHAASGGGGGGESCGMAMYSCHL
                ******* .*** ::* :* *  **:**  ..** ***: *   *.******::*****:

AT5G49700.1     GGSDVIWAPTARAPPPY--
pt002710_POPTR_ PANDVIWAPSARQPPPSPY
                 ..******:** ***
BoxShade v3.31 C (beta, 970507) Output
AT5G49700.1     - - M K G E Y - - R E Q K S N E - - - - M F S K L - P H H Q Q Q Q Q Q Q Q Q Q H S L T S H F H L S - - - - - - - - - - -
pt002710_POPTR_    M N M K G E Y V E R H Q A K H E N T P N M F S E L N P H H Q H L - - - - - - - - P F S Q H F Q L S R E S E E E D T R S T
 
AT5G49700.1     - S T V T P T - - - - - - - - - - - - - - - - V D D S S I E V V R R P R G R P P G S K N K P K P P V F V T R D T D P P M
pt002710_POPTR_    G A A T T P N P I P T S Q K L N E L N S S G G T D G A T I E V V R R P R G R P P G S K N K P K P P V I I T R E P E P A M
 
AT5G49700.1     S P Y I L E V P S G N D V V E A I N R F C R R K S I G V C V L S G S G S V A N V T L R Q P S P A A L G S T I T F H G K F
pt002710_POPTR_    S P Y I L E V P G G N D V V E A L S R F C R R K N M G I C V L T G T G T V A N V T L R Q P S T T P - G S T I T F H G R F
 
AT5G49700.1     D L L S V S A T F L P P P P R T S L S P P V S N F F T V S L A G P Q G Q I I G G F V A G P L I S A G T V Y V I A A S F N
pt002710_POPTR_    D I L S I S A T F L P - - - - Q T T S Y P L P N S F T I S L A G P Q G Q I V G G I V A G G L V A A G T V F V V A A S F N
 
AT5G49700.1     N P S Y H R L P A E E E Q K H S - A G T G E R E G Q S P P V S G G G E E S G Q M A - - - G S G G E S C G V S M Y S C H M
pt002710_POPTR_    N P S Y H R L Q V E E E G R N S G S G G G G G E G R S P V S G A G G G E S G H A A S G G G G G G E S C G M A M Y S C H L
 
AT5G49700.1     G G S D V I W A P T A R A P P P Y - -
pt002710_POPTR_    P A N D V I W A P S A R Q P P P S P Y
 
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