fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038464 not found in 305aa AT5G49700.1 1st_1st 0.638961038 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G49700.1     MKGEYRE--QKSNE----MFSKL-P-HHQQQQQQQQQQHSLTSHFH--------LSSTVT
pt038464_POPTR_ MKGEYVEHHQSKHENTPNMFSKLHPRHHQHLPFSQQYQFSRESEEEDTRSTGAAATPNLT
                ***** *  *..:*    ***** * ***:   .** *.*  *. .         :..:*

AT5G49700.1     PT--------------VDDSSIEVVRRPRGRPPGSKNKPKPPVFVTRDTDPPMSPYILEV
pt038464_POPTR_ PTTQKQKLNEPNSSGGTDGATIEVVRRPRGRPPGSKNKPKPPVIITRESEPSMSPYILEV
                **              .*.::**********************::**:::*.********

AT5G49700.1     PSGNDVVEAINRFCRRKSIGVCVLSGSGSVANVTLRQPSPAALGSTITFHGKFDLLSVSA
pt038464_POPTR_ PGGNDVVEALSRFCRRKNMGICVLTGSGTVANVTLRQPS-ATPGATITFHGRFDILSISA
                *.*******:.******.:*:***:***:********** *: *:******:**:**:**

AT5G49700.1     TFLPPPPRTSLSPPVSNFFTVSLAGPQGQIIGGFVAGPLISAGTVYVIAASFNNPSYHRL
pt038464_POPTR_ TFLP----QTASYPVPNSFTISLAGPQGQIVGGIVAGSLVAAGTVFVVAASFNNPSYHRL
                ****     : * **.* **:*********:**:***.*::****:*:************

AT5G49700.1     PAEEEQKHSAGTGEREGQSPPVSG-GGEESGQMA--GSGGESCGVSMYSCHMGGSDVIWA
pt038464_POPTR_ PLEEEGRTSGSDGGGEGQSPAVSGAGGGESGHAASGGGGGESCGIAMYSCHM-PNDVIWA
                * *** : *.. *  *****.*** ** ***: *  *.******::******  .*****

AT5G49700.1     PTAR--APPPY
pt038464_POPTR_ PAARPPPPPPY
                *:**  .****
BoxShade v3.31 C (beta, 970507) Output
AT5G49700.1     M K G E Y R E - - Q K S N E - - - - M F S K L - P - H H Q Q Q Q Q Q Q Q Q Q H S L T S H F H - - - - - - - - L S S T V T
pt038464_POPTR_    M K G E Y V E H H Q S K H E N T P N M F S K L H P R H H Q H L P F S Q Q Y Q F S R E S E E E D T R S T G A A A T P N L T
 
AT5G49700.1     P T - - - - - - - - - - - - - - V D D S S I E V V R R P R G R P P G S K N K P K P P V F V T R D T D P P M S P Y I L E V
pt038464_POPTR_    P T T Q K Q K L N E P N S S G G T D G A T I E V V R R P R G R P P G S K N K P K P P V I I T R E S E P S M S P Y I L E V
 
AT5G49700.1     P S G N D V V E A I N R F C R R K S I G V C V L S G S G S V A N V T L R Q P S P A A L G S T I T F H G K F D L L S V S A
pt038464_POPTR_    P G G N D V V E A L S R F C R R K N M G I C V L T G S G T V A N V T L R Q P S - A T P G A T I T F H G R F D I L S I S A
 
AT5G49700.1     T F L P P P P R T S L S P P V S N F F T V S L A G P Q G Q I I G G F V A G P L I S A G T V Y V I A A S F N N P S Y H R L
pt038464_POPTR_    T F L P - - - - Q T A S Y P V P N S F T I S L A G P Q G Q I V G G I V A G S L V A A G T V F V V A A S F N N P S Y H R L
 
AT5G49700.1     P A E E E Q K H S A G T G E R E G Q S P P V S G - G G E E S G Q M A - - G S G G E S C G V S M Y S C H M G G S D V I W A
pt038464_POPTR_    P L E E E G R T S G S D G G G E G Q S P A V S G A G G G E S G H A A S G G G G G E S C G I A M Y S C H M - P N D V I W A
 
AT5G49700.1     P T A R - - A P P P Y
pt038464_POPTR_    P A A R P P P P P P Y
 
0