fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038464 not found in 305aa AT5G49700.1 1st_1st 0.638961038 Ia
Pt002710 not found in 306aa AT5G49700.1 not_1st 0.633766233 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G49700.1     --MKGEY--REQKSNE----MFSKL-P-HHQ--------QQQQQQQQQHSLTSHFHLSST
pt038464_POPTR_ --MKGEYVEHHQSKHENTPNMFSKLHPRHHQHLPFSQQYQFSRESEEEDTRSTGAAATPN
pt002710_POPTR_ MNMKGEYVERHQAKHENTPNMFSELNP-HHQHLPFSQHFQLSRESEEEDTRSTGAATTPN
                  *****  :.* .:*    ***:* * ***        * .::.:::.: ::    :..

AT5G49700.1     VTPTV--------------DDSSIEVVRRPRGRPPGSKNKPKPPVFVTRDTDPPMSPYIL
pt038464_POPTR_ LTPTTQKQKLNEPNSSGGTDGATIEVVRRPRGRPPGSKNKPKPPVIITRESEPSMSPYIL
pt002710_POPTR_ PIPTS--QKLNELNSSGGTDGATIEVVRRPRGRPPGSKNKPKPPVIITREPEPAMSPYIL
                  **               *.::**********************::**:.:*.******

AT5G49700.1     EVPSGNDVVEAINRFCRRKSIGVCVLSGSGSVANVTLRQPSPAALGSTITFHGKFDLLSV
pt038464_POPTR_ EVPGGNDVVEALSRFCRRKNMGICVLTGSGTVANVTLRQPS-ATPGATITFHGRFDILSI
pt002710_POPTR_ EVPGGNDVVEALSRFCRRKNMGICVLTGTGTVANVTLRQPS-TTPGSTITFHGRFDILSI
                ***.*******:.******.:*:***:*:*:********** :: *:******:**:**:

AT5G49700.1     SATFLPPPPRTSLSPPVSNFFTVSLAGPQGQIIGGFVAGPLISAGTVYVIAASFNNPSYH
pt038464_POPTR_ SATFLP----QTASYPVPNSFTISLAGPQGQIVGGIVAGSLVAAGTVFVVAASFNNPSYH
pt002710_POPTR_ SATFLP----QTTSYPLPNSFTISLAGPQGQIVGGIVAGGLVAAGTVFVVAASFNNPSYH
                ******     : * *:.* **:*********:**:*** *::****:*:**********

AT5G49700.1     RLPAEEEQKHSAG-TGEREGQSPPVSG-GGEESGQMA---GSGGESCGVSMYSCHMGGSD
pt038464_POPTR_ RLPLEEEGRTSGS-DGGGEGQSPAVSGAGGGESGHAAS-GGGGGESCGIAMYSCHMP-ND
pt002710_POPTR_ RLQVEEEGRNSGSGGGGGEGRSP-VSGAGGGESGHAASGGGGGGESCGMAMYSCHLPAND
                **  *** : *..  *  **:** *** ** ***: *   *.******::*****:  .*

AT5G49700.1     VIWAPTARAPPPY--
pt038464_POPTR_ VIWAPAARPPPPPPY
pt002710_POPTR_ VIWAPSARQPPPSPY
                *****:** ***
BoxShade v3.31 C (beta, 970507) Output
AT5G49700.1     - - M K G E Y - - R E Q K S N E - - - - M F S K L - P - H H Q - - - - - - - - Q Q Q Q Q Q Q Q Q H S L T S H F H L S S T
pt038464_POPTR_    - - M K G E Y V E H H Q S K H E N T P N M F S K L H P R H H Q H L P F S Q Q Y Q F S R E S E E E D T R S T G A A A T P N
pt002710_POPTR_    M N M K G E Y V E R H Q A K H E N T P N M F S E L N P - H H Q H L P F S Q H F Q L S R E S E E E D T R S T G A A T T P N
 
AT5G49700.1     V T P T V - - - - - - - - - - - - - - D D S S I E V V R R P R G R P P G S K N K P K P P V F V T R D T D P P M S P Y I L
pt038464_POPTR_    L T P T T Q K Q K L N E P N S S G G T D G A T I E V V R R P R G R P P G S K N K P K P P V I I T R E S E P S M S P Y I L
pt002710_POPTR_    P I P T S - - Q K L N E L N S S G G T D G A T I E V V R R P R G R P P G S K N K P K P P V I I T R E P E P A M S P Y I L
 
AT5G49700.1     E V P S G N D V V E A I N R F C R R K S I G V C V L S G S G S V A N V T L R Q P S P A A L G S T I T F H G K F D L L S V
pt038464_POPTR_    E V P G G N D V V E A L S R F C R R K N M G I C V L T G S G T V A N V T L R Q P S - A T P G A T I T F H G R F D I L S I
pt002710_POPTR_    E V P G G N D V V E A L S R F C R R K N M G I C V L T G T G T V A N V T L R Q P S - T T P G S T I T F H G R F D I L S I
 
AT5G49700.1     S A T F L P P P P R T S L S P P V S N F F T V S L A G P Q G Q I I G G F V A G P L I S A G T V Y V I A A S F N N P S Y H
pt038464_POPTR_    S A T F L P - - - - Q T A S Y P V P N S F T I S L A G P Q G Q I V G G I V A G S L V A A G T V F V V A A S F N N P S Y H
pt002710_POPTR_    S A T F L P - - - - Q T T S Y P L P N S F T I S L A G P Q G Q I V G G I V A G G L V A A G T V F V V A A S F N N P S Y H
 
AT5G49700.1     R L P A E E E Q K H S A G - T G E R E G Q S P P V S G - G G E E S G Q M A - - - G S G G E S C G V S M Y S C H M G G S D
pt038464_POPTR_    R L P L E E E G R T S G S - D G G G E G Q S P A V S G A G G G E S G H A A S - G G G G G E S C G I A M Y S C H M P - N D
pt002710_POPTR_    R L Q V E E E G R N S G S G G G G G E G R S P - V S G A G G G E S G H A A S G G G G G G E S C G M A M Y S C H L P A N D
 
AT5G49700.1     V I W A P T A R A P P P Y - -
pt038464_POPTR_    V I W A P A A R P P P P P P Y
pt002710_POPTR_    V I W A P S A R Q P P P S P Y
 
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