fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G49700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009391 not found in 280aa AT5G49700.1 1st_1st 0.579220779 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G49700.1     MKGEYREQKSNE--------MFSKLPHHQQQQQQQQQQHSLTSH-FHLS----STVTPTV
gm009391_Glyma0 MKGEYVEQQQQHPKSETPPSMFSKL---------QPQHHPFPHHPFQLSAEDATTITPST
                ***** **:.:.        *****         * *:*.:. * *:**    :*:**:.

AT5G49700.1     ---------DDSSIEVVRRPRGRPPGSKNKPKPPVFVTRDTDPPMSPYILEVPSGNDVVE
gm009391_Glyma0 AQKANSSGGDGATIEVVRRPRGRPPGSKNKPKPPVIITRDPEPAMSPYILEVSGGNDVVE
                         *.::**********************::***.:*.********..******

AT5G49700.1     AINRFCRRKSIGVCVLSGSGSVANVTLRQPSPAALGSTITFHGKFDLLSVSATFLPPPPR
gm009391_Glyma0 AIAQFSHRKNMGICVLTGSGTVANVTLRQPSTTP-GTTVTFHGRFDILSVSATFL--PQQ
                ** :*.:**.:*:***:***:**********.:. *:*:****:**:********  * :

AT5G49700.1     TSLSPPVSNFFTVSLAGPQGQIIGGFVAGPLISAGTVYVIAASFNNPSYHRLPAEEEQKH
gm009391_Glyma0 SGASPAVPNGFAISLAGPQGQIVGGLVAGGLMAAGTVFVIAASFNNPAYHRLPPEEE---
                :. **.*.* *::*********:**:*** *::****:*********:*****.***   

AT5G49700.1     SAGTGEREGQSPPVSGGGEESGQMAGSG-GESCGVSMYSCHMGGSDVIWAPTAR----AP
gm009391_Glyma0 --GASAGDGHSPPVSGGGD-----SGHGQAESCGMSMYSCHL-PSDVIWAPTARPPPPPP
                  *:.  :*:********:     :* * .****:******:  **********    .*

AT5G49700.1     PPY
gm009391_Glyma0 PPY
                ***
BoxShade v3.31 C (beta, 970507) Output
AT5G49700.1     M K G E Y R E Q K S N E - - - - - - - - M F S K L P H H Q Q Q Q Q Q Q Q Q Q H S L T S H - F H L S - - - - S T V T P T V
gm009391_Glyma0    M K G E Y V E Q Q Q Q H P K S E T P P S M F S K L - - - - - - - - - Q P Q H H P F P H H P F Q L S A E D A T T I T P S T
 
AT5G49700.1     - - - - - - - - - D D S S I E V V R R P R G R P P G S K N K P K P P V F V T R D T D P P M S P Y I L E V P S G N D V V E
gm009391_Glyma0    A Q K A N S S G G D G A T I E V V R R P R G R P P G S K N K P K P P V I I T R D P E P A M S P Y I L E V S G G N D V V E
 
AT5G49700.1     A I N R F C R R K S I G V C V L S G S G S V A N V T L R Q P S P A A L G S T I T F H G K F D L L S V S A T F L P P P P R
gm009391_Glyma0    A I A Q F S H R K N M G I C V L T G S G T V A N V T L R Q P S T T P - G T T V T F H G R F D I L S V S A T F L - - P Q Q
 
AT5G49700.1     T S L S P P V S N F F T V S L A G P Q G Q I I G G F V A G P L I S A G T V Y V I A A S F N N P S Y H R L P A E E E Q K H
gm009391_Glyma0    S G A S P A V P N G F A I S L A G P Q G Q I V G G L V A G G L M A A G T V F V I A A S F N N P A Y H R L P P E E E - - -
 
AT5G49700.1     S A G T G E R E G Q S P P V S G G G E E S G Q M A G S G - G E S C G V S M Y S C H M G G S D V I W A P T A R - - - - A P
gm009391_Glyma0    - - G A S A G D G H S P P V S G G G D - - - - - S G H G Q A E S C G M S M Y S C H L - P S D V I W A P T A R P P P P P P
 
AT5G49700.1     P P Y
gm009391_Glyma0    P P Y
 
0