fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G50080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040520 not found in 457aa AT5G50080.1 1st_1st 0.338709677 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G50080.1     ------------------------------------------------------------
pt040520_POPTR_ MYILKVANQRGDPGEYTRYPATDNYDNQEERSYTAPQILSQLNQPVEHHVEVTQSPHMFM
                                                                            

AT5G50080.1     -------MSAMVSALTQVVSARSQTEAE--------------------------------
pt040520_POPTR_ GYSSSTEMS-MVSELTHVVSGQRGSTSDWGSYGAVGLGGATITSNFGQAAPGSNTSTPAS
                       ** *** **:***.:  : ::                                

AT5G50080.1     ---GAHSSSSSAGHKRGWLGID---------SAPIPSSFARVDSSHNPIEESM-------
pt040520_POPTR_ PPLSAYSSTSGSGL---WIGQKRGREEEAGAAAQLMESLPRVYRGFNDFRSSQGDSSSSG
                   .*:**:*.:*    *:* .         :* : .*:.**  ..* :..*        

AT5G50080.1     ---------------------SKAFP-------EEAREKKRRYRGVRQRPWGKWAAEIRD
pt040520_POPTR_ ATATEEVSASTIVIPTTTTPSTTATPSSEIASLEETGEQRRRYRGVRQRPWGKWAAEIRD
                                     :.* *       **: *::********************

AT5G50080.1     PHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRILP--------------
pt040520_POPTR_ PHKAARVWLGTFDTAEAAARAYDDAALRFRGNRAKLNFPENVRLLPAQTQNVTASQVPIS
                **:********************:********:*******:**:**              

AT5G50080.1     -------------------------PPPPLLRSPADTVANKAEEDLINYWSYTKLLQSSG
pt040520_POPTR_ HSQLSSHLQLQPISSPRQQAQRPQAPAPALFQSQADIIR--------DYWEYSQLLQSSG
                                         *.*.*::* ** :         :**.*::******

AT5G50080.1     QRSFLERGQEE--------------------------------------------SSNIF
pt040520_POPTR_ EFHHHQQQQQQQQQPSSLLQPMFYNPQVASLQSSALTSLSSSTSVSSLAAISSGSSPSTF
                :  . :: *::                                            *.. *

AT5G50080.1     EHSPMEQPL-----------PPSSSGPSS-SNFPAPSLPNT--------
pt040520_POPTR_ SPSASSFPLLFAGQQLGYFRPPQNQNPASGSDFPVPPWTDSSHNPSSSG
                . *. . **           **....*:* *:**.*. .::
BoxShade v3.31 C (beta, 970507) Output
AT5G50080.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt040520_POPTR_    M Y I L K V A N Q R G D P G E Y T R Y P A T D N Y D N Q E E R S Y T A P Q I L S Q L N Q P V E H H V E V T Q S P H M F M
 
AT5G50080.1     - - - - - - - M S A M V S A L T Q V V S A R S Q T E A E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt040520_POPTR_    G Y S S S T E M S - M V S E L T H V V S G Q R G S T S D W G S Y G A V G L G G A T I T S N F G Q A A P G S N T S T P A S
 
AT5G50080.1     - - - G A H S S S S S A G H K R G W L G I D - - - - - - - - - S A P I P S S F A R V D S S H N P I E E S M - - - - - - -
pt040520_POPTR_    P P L S A Y S S T S G S G L - - - W I G Q K R G R E E E A G A A A Q L M E S L P R V Y R G F N D F R S S Q G D S S S S G
 
AT5G50080.1     - - - - - - - - - - - - - - - - - - - - - S K A F P - - - - - - - E E A R E K K R R Y R G V R Q R P W G K W A A E I R D
pt040520_POPTR_    A T A T E E V S A S T I V I P T T T T P S T T A T P S S E I A S L E E T G E Q R R R Y R G V R Q R P W G K W A A E I R D
 
AT5G50080.1     P H R A A R V W L G T F D T A E A A A R A Y D E A A L R F R G N K A K L N F P E D V R I L P - - - - - - - - - - - - - -
pt040520_POPTR_    P H K A A R V W L G T F D T A E A A A R A Y D D A A L R F R G N R A K L N F P E N V R L L P A Q T Q N V T A S Q V P I S
 
AT5G50080.1     - - - - - - - - - - - - - - - - - - - - - - - - - P P P P L L R S P A D T V A N K A E E D L I N Y W S Y T K L L Q S S G
pt040520_POPTR_    H S Q L S S H L Q L Q P I S S P R Q Q A Q R P Q A P A P A L F Q S Q A D I I R - - - - - - - - D Y W E Y S Q L L Q S S G
 
AT5G50080.1     Q R S F L E R G Q E E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S N I F
pt040520_POPTR_    E F H H H Q Q Q Q Q Q Q Q Q P S S L L Q P M F Y N P Q V A S L Q S S A L T S L S S S T S V S S L A A I S S G S S P S T F
 
AT5G50080.1     E H S P M E Q P L - - - - - - - - - - - P P S S S G P S S - S N F P A P S L P N T - - - - - - - -
pt040520_POPTR_    S P S A S S F P L L F A G Q Q L G Y F R P P Q N Q N P A S G S D F P V P P W T D S S H N P S S S G
 
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