fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G50480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp015077 not found in 321aa AT1G56170.2 1st_not 0.466887417 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G50480.1     ----------------------MAENNNNNGDNMNNDNHQQPP--SYSQLPPMASS----
pp015077_Pp1s51 MENHQQLAQQQAQQQQQQDVQQQQQQQQHQQQTMNNMMAQQQPQMQYSQNMGMQQSYQGP
                                        :::::: :.***   ** *  .***   * .*    

AT5G50480.1     ----------------------------------------------NPQLRNYWIEQM--
pp015077_Pp1s51 QSLGGGPETSPSQGGQIQGQSPGAYPTALAQQQQAQLSYQHLQQQHQQQLQMFWANQMSE
                                                              : **: :* :**  

AT5G50480.1     -ETVSDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEEN
pp015077_Pp1s51 IEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACEMFILELTLRSWIHTEEN
                 * *.****:************** **:*:*****::*********::**:***:::***

AT5G50480.1     KRHTLQKSDISNAVASSFTYDFLLDVVPKDESIATADPGFVAMPHPDGGGVPQ-------
pp015077_Pp1s51 KRRTLQKNDIAAAITRTDIFDFLVDIVPRDE-----------LNKEDGLGVPRGAMPVGS
                **:****.**: *:: :  :***:*:**:**           : : ** ***:       

AT5G50480.1     -------YYY--PPGVV----------MGTPMVG---------SGMYAP-----------
pp015077_Pp1s51 PVSYEGVYYVQTPQGPVPQAAIGSPAMMGNSMMGVRPAMAMDPTAMYQPQPQSQPQRPPM
                       **   * * *          **..*:*         :.** *           

AT5G50480.1     ---------SQAW-------PAAAGDGEDDAEDNGGNGGGN
pp015077_Pp1s51 QYMQQQAPMQQMWQQQPTQMPPNQQAGMPPNS---------
                         .* *       *.    *    .
BoxShade v3.31 C (beta, 970507) Output
AT5G50480.1     - - - - - - - - - - - - - - - - - - - - - - M A E N N N N N G D N M N N D N H Q Q P P - - S Y S Q L P P M A S S - - - -
pp015077_Pp1s51    M E N H Q Q L A Q Q Q A Q Q Q Q Q Q D V Q Q Q Q Q Q Q Q H Q Q Q T M N N M M A Q Q Q P Q M Q Y S Q N M G M Q Q S Y Q G P
 
AT5G50480.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N P Q L R N Y W I E Q M - -
pp015077_Pp1s51    Q S L G G G P E T S P S Q G G Q I Q G Q S P G A Y P T A L A Q Q Q Q A Q L S Y Q H L Q Q Q H Q Q Q L Q M F W A N Q M S E
 
AT5G50480.1     - E T V S D F K N R Q L P L A R I K K I M K A D P D V H M V S A E A P I I F A K A C E M F I V D L T M R S W L K A E E N
pp015077_Pp1s51    I E Q V N D F K N H Q L P L A R I K K I M K A D E D V R M I S A E A P V L F A K A C E M F I L E L T L R S W I H T E E N
 
AT5G50480.1     K R H T L Q K S D I S N A V A S S F T Y D F L L D V V P K D E S I A T A D P G F V A M P H P D G G G V P Q - - - - - - -
pp015077_Pp1s51    K R R T L Q K N D I A A A I T R T D I F D F L V D I V P R D E - - - - - - - - - - - L N K E D G L G V P R G A M P V G S
 
AT5G50480.1     - - - - - - - Y Y Y - - P P G V V - - - - - - - - - - M G T P M V G - - - - - - - - - S G M Y A P - - - - - - - - - - -
pp015077_Pp1s51    P V S Y E G V Y Y V Q T P Q G P V P Q A A I G S P A M M G N S M M G V R P A M A M D P T A M Y Q P Q P Q S Q P Q R P P M
 
AT5G50480.1     - - - - - - - - - S Q A W - - - - - - - P A A A G D G E D D A E D N G G N G G G N
pp015077_Pp1s51    Q Y M Q Q Q A P M Q Q M W Q Q Q P T Q M P P N Q Q A G M P P N S - - - - - - - - -
 
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