fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G50480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os031976 not found in 205aa AT1G56170.2 1st_not 0.480132450 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G50480.1     MAENNNNNGDNMNNDNHQQPP------------------------SYSQLPPMASSNP--
Os031976_Os08t0 -----------MEPKSTTPPPPPPPPVLGAPVPYPPAGAYPPPVGPYAHAPPLYAPPPPA
                           *: ..   **                        .*:: **: :. *  

AT5G50480.1     ------------------QLRNYWIEQ---METVSDFKNRQLPLARIKKIMKADPDVHMV
Os031976_Os08t0 AAAASAAATAASQQAAAAQLQNFWAEQYREIEHTTDFKNHNLPLARIKKIMKADEDVRMI
                                  **:*:* **   :* .:****::************* **:*:

AT5G50480.1     SAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVPKD
Os031976_Os08t0 AAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIVPRD
                :****::**:******::** *.* :******:*******: *:* : .:***:*:**:*

AT5G50480.1     ESIATADPGFVA--MPHPDGG---GVPQYYYPPGVVMGTPMVGSGMYAPSQAWPAAAGDG
Os031976_Os08t0 EAKDAEAAAAVAAGIPHPAAGLPATDPMAYY---------------YVQPQ---------
                *:  :  .. **  :*** .*     *  **               *. .*         

AT5G50480.1     EDDAEDNGGNGGGN
Os031976_Os08t0 --------------
BoxShade v3.31 C (beta, 970507) Output
AT5G50480.1     M A E N N N N N G D N M N N D N H Q Q P P - - - - - - - - - - - - - - - - - - - - - - - - S Y S Q L P P M A S S N P - -
Os031976_Os08t0    - - - - - - - - - - - M E P K S T T P P P P P P P P V L G A P V P Y P P A G A Y P P P V G P Y A H A P P L Y A P P P P A
 
AT5G50480.1     - - - - - - - - - - - - - - - - - - Q L R N Y W I E Q - - - M E T V S D F K N R Q L P L A R I K K I M K A D P D V H M V
Os031976_Os08t0    A A A A S A A A T A A S Q Q A A A A Q L Q N F W A E Q Y R E I E H T T D F K N H N L P L A R I K K I M K A D E D V R M I
 
AT5G50480.1     S A E A P I I F A K A C E M F I V D L T M R S W L K A E E N K R H T L Q K S D I S N A V A S S F T Y D F L L D V V P K D
Os031976_Os08t0    A A E A P V V F A R A C E M F I L E L T H R G W A H A E E N K R R T L Q K S D I A A A I A R T E V F D F L V D I V P R D
 
AT5G50480.1     E S I A T A D P G F V A - - M P H P D G G - - - G V P Q Y Y Y P P G V V M G T P M V G S G M Y A P S Q A W P A A A G D G
Os031976_Os08t0    E A K D A E A A A A V A A G I P H P A A G L P A T D P M A Y Y - - - - - - - - - - - - - - - Y V Q P Q - - - - - - - - -
 
AT5G50480.1     E D D A E D N G G N G G G N
Os031976_Os08t0    - - - - - - - - - - - - - -
 
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