fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G50480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031239 not found in 365aa AT5G63470.2 1st_not 0.476821192 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G50480.1     ---MAENNNNNGDNMNNDNHQQPPSYSQLPPMASSNPQLRNYWIEQMETVSDFKNRQLPL
Sb031239_Sorbi1 IRSLSPEHPSNGAQI---HHPSPASGHGRARRVPSAPRRR---VPRRAVRARAGSRAVP-
                   :: :: .** ::   :* .*.*    .  ..* *: *   : :  . :   .* :* 

AT5G50480.1     ARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNAV
Sb031239_Sorbi1 --------SSP----AAAGSPNLAA--------------------GRR--------GGAA
                        :.*    .:* :* : *                    .:*        ..*.

AT5G50480.1     ASSFTYDFLLDVVPKDES-IATADPGFVAMPH----------------------PDGGGV
Sb031239_Sorbi1 AAA----LLGGAVPRDRGHHRLQEPQPAAGPHQEDHEGRRGRAHDRRRGARRLRPRLRDV
                *::    :* ..**:*..     :*  .* **                      *   .*

AT5G50480.1     PQYYYPP--GVVMG--TPMVGS-----------GMYAPSQAWPAAAGDGEDDAEDNGGNG
Sb031239_Sorbi1 HPRAHPPRLGARRGEQAPHPAEVRHRRRRRAHRGLRLPRRHRAAGRGQGSRLRRRHGTSR
                    :**  *.  *  :*  ..           *:  * :  .*. *:*.   . :* . 

AT5G50480.1     GGN-------------------------------------
Sb031239_Sorbi1 DPAPRRRPARHRPHGLLLRPAAVTNLASLPWSLCGFYLVN
                .
BoxShade v3.31 C (beta, 970507) Output
AT5G50480.1     - - - M A E N N N N N G D N M N N D N H Q Q P P S Y S Q L P P M A S S N P Q L R N Y W I E Q M E T V S D F K N R Q L P L
Sb031239_Sorbi1    I R S L S P E H P S N G A Q I - - - H H P S P A S G H G R A R R V P S A P R R R - - - V P R R A V R A R A G S R A V P -
 
AT5G50480.1     A R I K K I M K A D P D V H M V S A E A P I I F A K A C E M F I V D L T M R S W L K A E E N K R H T L Q K S D I S N A V
Sb031239_Sorbi1    - - - - - - - - S S P - - - - A A A G S P N L A A - - - - - - - - - - - - - - - - - - - - G R R - - - - - - - - G G A A
 
AT5G50480.1     A S S F T Y D F L L D V V P K D E S - I A T A D P G F V A M P H - - - - - - - - - - - - - - - - - - - - - - P D G G G V
Sb031239_Sorbi1    A A A - - - - L L G G A V P R D R G H H R L Q E P Q P A A G P H Q E D H E G R R G R A H D R R R G A R R L R P R L R D V
 
AT5G50480.1     P Q Y Y Y P P - - G V V M G - - T P M V G S - - - - - - - - - - - G M Y A P S Q A W P A A A G D G E D D A E D N G G N G
Sb031239_Sorbi1    H P R A H P P R L G A R R G E Q A P H P A E V R H R R R R R A H R G L R L P R R H R A A G R G Q G S R L R R R H G T S R
 
AT5G50480.1     G G N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031239_Sorbi1    D P A P R R R P A R H R P H G L L L R P A A V T N L A S L P W S L C G F Y L V N
 
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