fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm053963 not found in 266aa AT5G61600.1 1st_not 0.4 II
Pt009948 not found in 288aa AT5G51190.1 not_1st 0.460465116 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G51190.1     MASSHQQQQEQDQSALDLITQHLLT-------DFPSLDT-------FASTIHHCTT----
gm053963_Glyma2 MQSS------ISQSEI-CITDYLLPQEVPSQFQFPDMSN--NNI----------------
pt009948_POPTR_ MASF------DEASALELIREHLLT-------DFASMDSLITNLDDLCSTSSSCITTDYI
                * *        . * :  * ::**.       :*..:..                     

AT5G51190.1     -------------------------------------STLSQRKPPL-ATIAVP------
gm053963_Glyma2 --------PMNHTNLQMPQITSF----SKP---PRSSSNLSNRKPSL-RNITIPSITSGL
pt009948_POPTR_ KTESTEFDPFNQSEHPQPKLQSQSSIESKPQSSPKSPSTLSQRKPSMIKNIAIP------
                                                     *.**:***.:  .*::*      

AT5G51190.1     --------TTA----------PVVQEND-------QRHYRGVRRRPWGKYAAEIRDPNKK
gm053963_Glyma2 TTTMSQTTTTTTIATTMYNNNQVTSSSDETNNIKENKHYRGVRRRPWGKYAAEIRDPNRK
pt009948_POPTR_ --------PPATLNMTPQVVQPVVIKADVSS--EQERHYRGVRRRPWGKYAAEIRDPNKK
                        ..:           *. . *       ::*********************:*

AT5G51190.1     GVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAGKHEDLGDNKKTISLKAKRKR
gm053963_Glyma2 GSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAILNFPLEIGESEE--SVSSCIKVGVKRER
pt009948_POPTR_ GARVWLGTFDTAIEAAKAYDSAAFRLRGSKAILNFPLEAGKSNS--QQPEQFLETSSKKR
                * **********:***:.**.***::************ *: :.  .  . :    .::*

AT5G51190.1     QVTEDESQL---------ISRKAVKRE----EAQVQADAC-PLTPSSWKGFWDGADSKDM
gm053963_Glyma2 EEESKSNNYEKSEFNNNNNSNKHVKKE----ECSPKAVC--PLTPSCWKGFWDT---DVM
pt009948_POPTR_ KIEEIESSMEST---GSVITNKVAKRESSSPETEVKAAATEPLTPSSWKGFWDG---EVM
                :  . ...           :.* .*:*    * . :* .  *****.******    . *

AT5G51190.1     G-IFSVPLLSPC---PSLGHSQLVVT
gm053963_Glyma2 GTIFSVPPLSPLSP--------LMVV
pt009948_POPTR_ G-IFNVPPLSPLSPHPSFGYSRLMVV
                * **.** ***           *:*.
BoxShade v3.31 C (beta, 970507) Output
AT5G51190.1     M A S S H Q Q Q Q E Q D Q S A L D L I T Q H L L T - - - - - - - D F P S L D T - - - - - - - F A S T I H H C T T - - - -
gm053963_Glyma2    M Q S S - - - - - - I S Q S E I - C I T D Y L L P Q E V P S Q F Q F P D M S N - - N N I - - - - - - - - - - - - - - - -
pt009948_POPTR_    M A S F - - - - - - D E A S A L E L I R E H L L T - - - - - - - D F A S M D S L I T N L D D L C S T S S S C I T T D Y I
 
AT5G51190.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S T L S Q R K P P L - A T I A V P - - - - - -
gm053963_Glyma2    - - - - - - - - P M N H T N L Q M P Q I T S F - - - - S K P - - - P R S S S N L S N R K P S L - R N I T I P S I T S G L
pt009948_POPTR_    K T E S T E F D P F N Q S E H P Q P K L Q S Q S S I E S K P Q S S P K S P S T L S Q R K P S M I K N I A I P - - - - - -
 
AT5G51190.1     - - - - - - - - T T A - - - - - - - - - - P V V Q E N D - - - - - - - Q R H Y R G V R R R P W G K Y A A E I R D P N K K
gm053963_Glyma2    T T T M S Q T T T T T T I A T T M Y N N N Q V T S S S D E T N N I K E N K H Y R G V R R R P W G K Y A A E I R D P N R K
pt009948_POPTR_    - - - - - - - - P P A T L N M T P Q V V Q P V V I K A D V S S - - E Q E R H Y R G V R R R P W G K Y A A E I R D P N K K
 
AT5G51190.1     G V R V W L G T F D T A M E A A R G Y D K A A F K L R G S K A I L N F P L E A G K H E D L G D N K K T I S L K A K R K R
gm053963_Glyma2    G S R V W L G T F D T A I E A A K A Y D K A A F K M R G S K A I L N F P L E I G E S E E - - S V S S C I K V G V K R E R
pt009948_POPTR_    G A R V W L G T F D T A I E A A K A Y D S A A F R L R G S K A I L N F P L E A G K S N S - - Q Q P E Q F L E T S S K K R
 
AT5G51190.1     Q V T E D E S Q L - - - - - - - - - I S R K A V K R E - - - - E A Q V Q A D A C - P L T P S S W K G F W D G A D S K D M
gm053963_Glyma2    E E E S K S N N Y E K S E F N N N N N S N K H V K K E - - - - E C S P K A V C - - P L T P S C W K G F W D T - - - D V M
pt009948_POPTR_    K I E E I E S S M E S T - - - G S V I T N K V A K R E S S S P E T E V K A A A T E P L T P S S W K G F W D G - - - E V M
 
AT5G51190.1     G - I F S V P L L S P C - - - P S L G H S Q L V V T
gm053963_Glyma2    G T I F S V P P L S P L S P - - - - - - - - L M V V
pt009948_POPTR_    G - I F N V P P L S P L S P H P S F G Y S R L M V V
 
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