fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009948 not found in 288aa AT5G51190.1 not_1st 0.460465116 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51190.1     MASSHQQQQEQDQSALDLITQHLLTDFPSLDT-------FASTIHHCTT-----------
pt009948_POPTR_ MASF------DEASALELIREHLLTDFASMDSLITNLDDLCSTSSSCITTDYIKTESTEF
                ***       :: ***:** :******.*:*:       :.**   * *           

AT5G51190.1     ------------------------------STLSQRKPPL-ATIAVPTTA----------
pt009948_POPTR_ DPFNQSEHPQPKLQSQSSIESKPQSSPKSPSTLSQRKPSMIKNIAIPPPATLNMTPQVVQ
                                              ********.:  .**:*..*          

AT5G51190.1     PVVQEND-----QRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAA
pt009948_POPTR_ PVVIKADVSSEQERHYRGVRRRPWGKYAAEIRDPNKKGARVWLGTFDTAIEAAKAYDSAA
                *** : *     :*************************.**********:***:.**.**

AT5G51190.1     FKLRGSKAILNFPLEAGKHEDLGDNKKTISLKAKRKRQVTEDESQL------ISRKAVKR
pt009948_POPTR_ FRLRGSKAILNFPLEAGKSNS--QQPEQFLETSSKKRKIEEIESSMESTGSVITNKVAKR
                *:**************** :.  :: : :  .:.:**:: * **.:      *:.*..**

AT5G51190.1     E----EAQVQADAC-PLTPSSWKGFWDGADSKDMGIFSVPLLSPC---PSLGHSQLVVT
pt009948_POPTR_ ESSSPETEVKAAATEPLTPSSWKGFWDG---EVMGIFNVPPLSPLSPHPSFGYSRLMVV
                *    *::*:* *  *************   : ****.** ***    **:*:*:*:*.
BoxShade v3.31 C (beta, 970507) Output
AT5G51190.1     M A S S H Q Q Q Q E Q D Q S A L D L I T Q H L L T D F P S L D T - - - - - - - F A S T I H H C T T - - - - - - - - - - -
pt009948_POPTR_    M A S F - - - - - - D E A S A L E L I R E H L L T D F A S M D S L I T N L D D L C S T S S S C I T T D Y I K T E S T E F
 
AT5G51190.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S T L S Q R K P P L - A T I A V P T T A - - - - - - - - - -
pt009948_POPTR_    D P F N Q S E H P Q P K L Q S Q S S I E S K P Q S S P K S P S T L S Q R K P S M I K N I A I P P P A T L N M T P Q V V Q
 
AT5G51190.1     P V V Q E N D - - - - - Q R H Y R G V R R R P W G K Y A A E I R D P N K K G V R V W L G T F D T A M E A A R G Y D K A A
pt009948_POPTR_    P V V I K A D V S S E Q E R H Y R G V R R R P W G K Y A A E I R D P N K K G A R V W L G T F D T A I E A A K A Y D S A A
 
AT5G51190.1     F K L R G S K A I L N F P L E A G K H E D L G D N K K T I S L K A K R K R Q V T E D E S Q L - - - - - - I S R K A V K R
pt009948_POPTR_    F R L R G S K A I L N F P L E A G K S N S - - Q Q P E Q F L E T S S K K R K I E E I E S S M E S T G S V I T N K V A K R
 
AT5G51190.1     E - - - - E A Q V Q A D A C - P L T P S S W K G F W D G A D S K D M G I F S V P L L S P C - - - P S L G H S Q L V V T
pt009948_POPTR_    E S S S P E T E V K A A A T E P L T P S S W K G F W D G - - - E V M G I F N V P P L S P L S P H P S F G Y S R L M V V
 
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