fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010969 not found in 355aa AT5G47230.1 not_not 0.413953488 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51190.1     MASSHQQQQEQDQSALDLITQHLLTDF--P-----------SLDTFASTIHHCTTST---
pt010969_POPTR_ ---METDQTQQVSSALESIKQHLLGDLLSPVATSSASFYQFSTNSATSTSLQCETTSCSS
                    . :* :* .***: *.**** *:  *           * :: :**  :* *::   

AT5G51190.1     ------------------------------------------------------------
pt010969_POPTR_ SDFSTALPDFFGSLLEFTSVLSPSQENNTNIFEFEPKPEIIDLFTPTPLNSTSHINFQSS
                                                                            

AT5G51190.1     ---------------------------------LSQR---------KPPLAT-------I
pt010969_POPTR_ SSSTGSSGGSNFFEFESKPQIHQNFEFESKPQIVSQRSNSFFYEEPKPQVQTARKRSLKI
                                                 :***         ** : *       *

AT5G51190.1     AVPTTAP------------VVQEN------DQRHYRGVRRRPWGKYAAEIRDPNKKGVRV
pt010969_POPTR_ SLPSKKPEWIQFSSNPNPQTVEDNSGVAAQEIRHYRGVRRRPWGKYAAEIRDPNRRGSRV
                ::*:. *            .*::*      : **********************::* **

AT5G51190.1     WLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAGKHEDLGDNKKTISLKAKRKRQVTE
pt010969_POPTR_ WLGTFDTDLEAAKAYDRAAFKLRGSKAILNFPLEAGRCEEESERKRS------REGGVEE
                ******* :***:.**:*******************: *: .:.*::      *:  * *

AT5G51190.1     DESQLISRKAVKREEAQVQADACPLTPSSWKGFWDGADSKDMGIFSVPLLSPC---PSLG
pt010969_POPTR_ REDVKRVMTVVKREEPETEGD-IPLTPSSWTAFWDGGDTKD--VFNVPPLSPLSPHPPLG
                 *.     ..*****.:.:.*  *******..****.*:**  :*.** ***    *.**

AT5G51190.1     HSQLVVT
pt010969_POPTR_ FPQLTVI
                ..**.*
BoxShade v3.31 C (beta, 970507) Output
AT5G51190.1     M A S S H Q Q Q Q E Q D Q S A L D L I T Q H L L T D F - - P - - - - - - - - - - - S L D T F A S T I H H C T T S T - - -
pt010969_POPTR_    - - - M E T D Q T Q Q V S S A L E S I K Q H L L G D L L S P V A T S S A S F Y Q F S T N S A T S T S L Q C E T T S C S S
 
AT5G51190.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt010969_POPTR_    S D F S T A L P D F F G S L L E F T S V L S P S Q E N N T N I F E F E P K P E I I D L F T P T P L N S T S H I N F Q S S
 
AT5G51190.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L S Q R - - - - - - - - - K P P L A T - - - - - - - I
pt010969_POPTR_    S S S T G S S G G S N F F E F E S K P Q I H Q N F E F E S K P Q I V S Q R S N S F F Y E E P K P Q V Q T A R K R S L K I
 
AT5G51190.1     A V P T T A P - - - - - - - - - - - - V V Q E N - - - - - - D Q R H Y R G V R R R P W G K Y A A E I R D P N K K G V R V
pt010969_POPTR_    S L P S K K P E W I Q F S S N P N P Q T V E D N S G V A A Q E I R H Y R G V R R R P W G K Y A A E I R D P N R R G S R V
 
AT5G51190.1     W L G T F D T A M E A A R G Y D K A A F K L R G S K A I L N F P L E A G K H E D L G D N K K T I S L K A K R K R Q V T E
pt010969_POPTR_    W L G T F D T D L E A A K A Y D R A A F K L R G S K A I L N F P L E A G R C E E E S E R K R S - - - - - - R E G G V E E
 
AT5G51190.1     D E S Q L I S R K A V K R E E A Q V Q A D A C P L T P S S W K G F W D G A D S K D M G I F S V P L L S P C - - - P S L G
pt010969_POPTR_    R E D V K R V M T V V K R E E P E T E G D - I P L T P S S W T A F W D G G D T K D - - V F N V P P L S P L S P H P P L G
 
AT5G51190.1     H S Q L V V T
pt010969_POPTR_    F P Q L T V I
 
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