fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032606 not found in 287aa AT5G51190.1 1st_1st 0.465116279 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51190.1     MASSHQQQQEQDQSALDLITQHLLTDFPSLDTFASTIHH-CTTST---------------
pt032606_POPTR_ MASF-----DHEASTLELIRQHLLTDFASMDSFISNLDDLCSTSTTSTTDDYYIKSESTE
                ***      ::: *:*:** *******.*:*:* *.:.. *:***               

AT5G51190.1     -------------------------------LSQRKPPL-ATIAVPTTA----------P
pt032606_POPTR_ FDPFDQPQFKLQTQSSIESKPQYSSPKSSTSLSQRKPSMIKDIAIPPPATLNMNPQVAQP
                                               ******.:   **:*..*          *

AT5G51190.1     VVQEND-----QRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAF
pt032606_POPTR_ VVNKTDLSSEQDRHYRGVRRRPWGKYAAEIRDPNKKGARVWLGTFDTAIEAAKAYDSAAF
                **::.*     :*************************.**********:***:.**.***

AT5G51190.1     KLRGSKAILNFPLEAGKHEDLGDNKKTISLKAKRKR----QVTEDESQLISRKAVKRE--
pt032606_POPTR_ RLRGSKAILNFPLEAGK-SNSQQPEQFLETSCKKRKFEGIKSSVEGTNSITNKVVKRETS
                :**************** .:  : :: :. ..*:::    : : : :: *:.*.****  

AT5G51190.1     --EAQVQADAC-PLTPSSWKGFWDGADSKDMGIFSVPLLSPC---PSLGHSQLVVT
pt032606_POPTR_ SPESEVKAVASGPLTPSSWKGFWDG---ETMGIFSVPPLSPLSPHPSFGYSRLMVV
                  *::*:* *. *************   : ******* ***    **:*:*:*:*.
BoxShade v3.31 C (beta, 970507) Output
AT5G51190.1     M A S S H Q Q Q Q E Q D Q S A L D L I T Q H L L T D F P S L D T F A S T I H H - C T T S T - - - - - - - - - - - - - - -
pt032606_POPTR_    M A S F - - - - - D H E A S T L E L I R Q H L L T D F A S M D S F I S N L D D L C S T S T T S T T D D Y Y I K S E S T E
 
AT5G51190.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L S Q R K P P L - A T I A V P T T A - - - - - - - - - - P
pt032606_POPTR_    F D P F D Q P Q F K L Q T Q S S I E S K P Q Y S S P K S S T S L S Q R K P S M I K D I A I P P P A T L N M N P Q V A Q P
 
AT5G51190.1     V V Q E N D - - - - - Q R H Y R G V R R R P W G K Y A A E I R D P N K K G V R V W L G T F D T A M E A A R G Y D K A A F
pt032606_POPTR_    V V N K T D L S S E Q D R H Y R G V R R R P W G K Y A A E I R D P N K K G A R V W L G T F D T A I E A A K A Y D S A A F
 
AT5G51190.1     K L R G S K A I L N F P L E A G K H E D L G D N K K T I S L K A K R K R - - - - Q V T E D E S Q L I S R K A V K R E - -
pt032606_POPTR_    R L R G S K A I L N F P L E A G K - S N S Q Q P E Q F L E T S C K K R K F E G I K S S V E G T N S I T N K V V K R E T S
 
AT5G51190.1     - - E A Q V Q A D A C - P L T P S S W K G F W D G A D S K D M G I F S V P L L S P C - - - P S L G H S Q L V V T
pt032606_POPTR_    S P E S E V K A V A S G P L T P S S W K G F W D G - - - E T M G I F S V P P L S P L S P H P S F G Y S R L M V V
 
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