fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm053963 not found in 266aa AT5G61600.1 1st_not 0.4 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51190.1     MASSHQQQ-----------------QEQDQSALDLITQHLLTDFPSLDTFASTIHHCTTS
gm053963_Glyma2 MQSSISQSEICITDYLLPQEVPSQFQFPDMSNNNIPMNHTNLQMPQITSFSKPPR--SSS
                * ** .*.                 *  * *  ::  :*   ::*.: :*:.. :  ::*

AT5G51190.1     TLSQRKPPLATIAVP-----------------TTAPVVQENDQ--------------RHY
gm053963_Glyma2 NLSNRKPSLRNITIPSITSGLTTTMSQTTTTTTIATTMYNNNQVTSSSDETNNIKENKHY
                .**:***.* .*::*                 * *..: :*:*              :**

AT5G51190.1     RGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEA
gm053963_Glyma2 RGVRRRPWGKYAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFKMRGSKAILNFPLEI
                *******************:** **********:***:.*******:************ 

AT5G51190.1     GKHEDLGDNKKTISLKAKRKRQVTEDESQL------------ISRKAVKREEAQVQADAC
gm053963_Glyma2 GESEE--SVSSCIKVGVKRER---EEESKSNNYEKSEFNNNNNSNKHVKKEECSPKA-VC
                *: *:  . .. *.: .**:*   *:**:              *.* **:**.. :* .*

AT5G51190.1     PLTPSSWKGFWDGADSKDMG-IFSVPLLSPCPSLGHSQLVVT
gm053963_Glyma2 PLTPSCWKGFW---DTDVMGTIFSVPPLSPLSPL----MVV-
                *****.*****   *:. ** ***** *** ..*    :**
BoxShade v3.31 C (beta, 970507) Output
AT5G51190.1     M A S S H Q Q Q - - - - - - - - - - - - - - - - - Q E Q D Q S A L D L I T Q H L L T D F P S L D T F A S T I H H C T T S
gm053963_Glyma2    M Q S S I S Q S E I C I T D Y L L P Q E V P S Q F Q F P D M S N N N I P M N H T N L Q M P Q I T S F S K P P R - - S S S
 
AT5G51190.1     T L S Q R K P P L A T I A V P - - - - - - - - - - - - - - - - - T T A P V V Q E N D Q - - - - - - - - - - - - - - R H Y
gm053963_Glyma2    N L S N R K P S L R N I T I P S I T S G L T T T M S Q T T T T T T I A T T M Y N N N Q V T S S S D E T N N I K E N K H Y
 
AT5G51190.1     R G V R R R P W G K Y A A E I R D P N K K G V R V W L G T F D T A M E A A R G Y D K A A F K L R G S K A I L N F P L E A
gm053963_Glyma2    R G V R R R P W G K Y A A E I R D P N R K G S R V W L G T F D T A I E A A K A Y D K A A F K M R G S K A I L N F P L E I
 
AT5G51190.1     G K H E D L G D N K K T I S L K A K R K R Q V T E D E S Q L - - - - - - - - - - - - I S R K A V K R E E A Q V Q A D A C
gm053963_Glyma2    G E S E E - - S V S S C I K V G V K R E R - - - E E E S K S N N Y E K S E F N N N N N S N K H V K K E E C S P K A - V C
 
AT5G51190.1     P L T P S S W K G F W D G A D S K D M G - I F S V P L L S P C P S L G H S Q L V V T
gm053963_Glyma2    P L T P S C W K G F W - - - D T D V M G T I F S V P P L S P L S P L - - - - M V V -
 
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