fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026795 not found in 246aa AT4G25410.1 not_not 0.446945337 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51780.1     ---------------------------------------------ME-------------
pt026795_POPTR_ MFPLHQGGELCFKISSSPHQQDNIPDLILAHQYAEIHGSTDITNNMEKGRRRNIISMDNN
                                                             **             

AT5G51780.1     ------------KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYI
pt026795_POPTR_ EAARDNNNNSKKKMMHRDIERQRRQEMTTLYASLRALLPLEFIKGKRSISDHMNEAVNYI
                            *****: ********::******:****.******* **::*******

AT5G51780.1     KYLQRKIKELSVRRDDLMVLSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLS
pt026795_POPTR_ KYLQKKIKETSAKRDELKKLSDFSSVASPSGCSNK-----SSSSSVALQPYPGGIEITFD
                ****:**** *.:**:*  **  * :.*..*  ::     *... *.::    *:** :.

AT5G51780.1     SRCCGGQPRFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELEKRL
pt026795_POPTR_ SDLMGRDLPLSRVLQVLLEEGISVINCVSTKVNERLFHSVQTEVNDPTCL-NLSELWQKL
                *   * :  :* ***** * *:.::*.:*: *::**.:::*:**** : : :*:** ::*

AT5G51780.1     IRMK--------
pt026795_POPTR_ TLVVSSTSDLSK
                  :
BoxShade v3.31 C (beta, 970507) Output
AT5G51780.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E - - - - - - - - - - - - -
pt026795_POPTR_    M F P L H Q G G E L C F K I S S S P H Q Q D N I P D L I L A H Q Y A E I H G S T D I T N N M E K G R R R N I I S M D N N
 
AT5G51780.1     - - - - - - - - - - - - K M M H R E T E R Q R R Q E M A S L Y A S L R S L L P L H F I K G K R S T S D Q V N E A V N Y I
pt026795_POPTR_    E A A R D N N N N S K K K M M H R D I E R Q R R Q E M T T L Y A S L R A L L P L E F I K G K R S I S D H M N E A V N Y I
 
AT5G51780.1     K Y L Q R K I K E L S V R R D D L M V L S R G S L L G S S N G D F K E D V E M I S G K N H V V V R Q C L V G V E I M L S
pt026795_POPTR_    K Y L Q K K I K E T S A K R D E L K K L S D F S S V A S P S G C S N K - - - - - S S S S S V A L Q P Y P G G I E I T F D
 
AT5G51780.1     S R C C G G Q P R F S S V L Q V L S E Y G L C L L N S I S S I V D D R L V Y T I Q A E V N D M A L M I D L A E L E K R L
pt026795_POPTR_    S D L M G R D L P L S R V L Q V L L E E G I S V I N C V S T K V N E R L F H S V Q T E V N D P T C L - N L S E L W Q K L
 
AT5G51780.1     I R M K - - - - - - - -
pt026795_POPTR_    T L V V S S T S D L S K
 
0