fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023916 not found in 240aa AT4G25410.1 1st_not 0.450160771 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51780.1     --------------------------------------------ME--------------
pt023916_POPTR_ MFPLHQGDELCFNISSDPHQQHNIPQDLILARYAALQGSDTTNKMENDRRRFLISMDSNH
                                                            **              

AT5G51780.1     ------------KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYI
pt023916_POPTR_ EVARDHSKNNNKKMMHRNIERQRRQEMTTLYASLRALLPLEFIKGKRSISDHMNESVNYI
                            *****: ********::******:****.******* **::**:****

AT5G51780.1     KYLQRKIKELSVRRDDLMV---LSRGSLLGSSNGDFKEDVEMISGKNHVVVRQCLVGVEI
pt023916_POPTR_ KYLQKKIKELSAKRDGLKKSPNLSFDSPSGSSN--------KYSPISPVTLQPYPGGIEV
                ****:******.:**.*     ** .*  ****          *  . *.::    *:*:

AT5G51780.1     MLSSRCCGGQPRFSSVLQVLSEYGLCLLNSISSIVDDRLVYTIQAEVNDMALMIDLAELE
pt023916_POPTR_ VFDSDFRGQDSPLSRVLQVLLEEGISVVNCVSTKVNERLFHTVQTEVNDPACL-NLSELR
                ::.*   * :. :* ***** * *:.::*.:*: *::**.:*:*:**** * : :*:**.

AT5G51780.1     KRL-IRMK-
pt023916_POPTR_ QKLTLRVVS
                ::* :*:
BoxShade v3.31 C (beta, 970507) Output
AT5G51780.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E - - - - - - - - - - - - - -
pt023916_POPTR_    M F P L H Q G D E L C F N I S S D P H Q Q H N I P Q D L I L A R Y A A L Q G S D T T N K M E N D R R R F L I S M D S N H
 
AT5G51780.1     - - - - - - - - - - - - K M M H R E T E R Q R R Q E M A S L Y A S L R S L L P L H F I K G K R S T S D Q V N E A V N Y I
pt023916_POPTR_    E V A R D H S K N N N K K M M H R N I E R Q R R Q E M T T L Y A S L R A L L P L E F I K G K R S I S D H M N E S V N Y I
 
AT5G51780.1     K Y L Q R K I K E L S V R R D D L M V - - - L S R G S L L G S S N G D F K E D V E M I S G K N H V V V R Q C L V G V E I
pt023916_POPTR_    K Y L Q K K I K E L S A K R D G L K K S P N L S F D S P S G S S N - - - - - - - - K Y S P I S P V T L Q P Y P G G I E V
 
AT5G51780.1     M L S S R C C G G Q P R F S S V L Q V L S E Y G L C L L N S I S S I V D D R L V Y T I Q A E V N D M A L M I D L A E L E
pt023916_POPTR_    V F D S D F R G Q D S P L S R V L Q V L L E E G I S V V N C V S T K V N E R L F H T V Q T E V N D P A C L - N L S E L R
 
AT5G51780.1     K R L - I R M K -
pt023916_POPTR_    Q K L T L R V V S
 
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