fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp024263 not found in 491aa AT5G51980.1 not_1st 0.447309417 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51980.1     ----MDFDLNG----GNKRVFNRLGGGGGSTRPMAPTDTRQKVCFHWRAGRCNR-SPCPY
pp024263_Pp1s20 MMAGMEVD-DGSTRVGSKRNYSRSGNAAGSGGGAGGRSHGQQVCRYWQEGRCVKGDDCQW
                    *:.* :*    *.** :.* *...**    .  .  *:** :*: *** : . * :

AT5G51980.1     LH---------------------------RELPGPGPGQGQGPGYTNKRVAEESGFAGPS
pp024263_Pp1s20 LHPGNAGSTGRGNSAGSAKRSNNAHEYRDREARDPAGGWGYGGG----------GFTSGS
                **                           **  .*. * * * *          **:. *

AT5G51980.1     HRRGPGFNGNSSSSWGRFG-------------------GNRTVTKTEKVCNFWVDGNCTY
pp024263_Pp1s20 NQGRP---RNVSARWGRGGRGGRSGRGSHDQRDNRFQEGGRSHTPKQKPCSYWLKGNCMR
                ::  *    * *: *** *                   *.*: * .:* *.:*:.***  

AT5G51980.1     GDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQC
pp024263_Pp1s20 GDTCNFLHAHTTAPDMEMTTVLNGHEKAVRAIVLPEAHAQLYTGSQDESVRVWDCTTGKC
                **.*.:**. :.. .: : * *:**** * .*.**..  :*****:**::*****::*:*

AT5G51980.1     TGVLKLGGEIGCVLSEGPWLLVGMPNLVKAWNIETNADQSLSGPVGQVYSLVVGTD-LLF
pp024263_Pp1s20 TNVAPMGGDVGALIFAKGWLFVGLPNEVKVINMATLQQANLSGPKGQVHALAVTDDGLLF
                *.*  :**::*.::    **:**:** **. *: *  : .**** ***::*.*  * ***

AT5G51980.1     AGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDNL
pp024263_Pp1s20 AGTHDGTILIWQFNAATNQFEPAASMSGHTGPVVTLMLIANRLYSGSMDSTIRVWEFATL
                ***:**:** *::***** ***:**::*** .**** : **********.**:**.: .*

AT5G51980.1     QCIQTLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEH-------
pp024263_Pp1s20 QCVQALEGHTNVVMDLLCWDSFLLSCSLDGTIKIWSVNSSGQLELTFSHPEEENQSDSRN
                **:*:* .*:.***.*:***.********.*:***:. ..*:**:*::* **.       

AT5G51980.1     ----GVLALCGVHDAEAKPVLLCACNDNTLRLYDLPSFTERGKIFAKQEIRAIQIGPGGI
pp024263_Pp1s20 ITLAGALKMCGCTDKAGKPVLLCSYNDNIVRLYDLPTFTERGQLFSREEVRALQVGLNNL
                    *.* :**  *  .******: *** :******:*****::*:::*:**:*:* ..:

AT5G51980.1     FFTGDGTGQVKVWKWC-TEPTAALP
pp024263_Pp1s20 VFSGDSRGDVKVWSWIDTHPEAVVN
                .*:**. *:****.*  *.* *.:
BoxShade v3.31 C (beta, 970507) Output
AT5G51980.1     - - - - M D F D L N G - - - - G N K R V F N R L G G G G G S T R P M A P T D T R Q K V C F H W R A G R C N R - S P C P Y
pp024263_Pp1s20    M M A G M E V D - D G S T R V G S K R N Y S R S G N A A G S G G G A G G R S H G Q Q V C R Y W Q E G R C V K G D D C Q W
 
AT5G51980.1     L H - - - - - - - - - - - - - - - - - - - - - - - - - - - R E L P G P G P G Q G Q G P G Y T N K R V A E E S G F A G P S
pp024263_Pp1s20    L H P G N A G S T G R G N S A G S A K R S N N A H E Y R D R E A R D P A G G W G Y G G G - - - - - - - - - - G F T S G S
 
AT5G51980.1     H R R G P G F N G N S S S S W G R F G - - - - - - - - - - - - - - - - - - - G N R T V T K T E K V C N F W V D G N C T Y
pp024263_Pp1s20    N Q G R P - - - R N V S A R W G R G G R G G R S G R G S H D Q R D N R F Q E G G R S H T P K Q K P C S Y W L K G N C M R
 
AT5G51980.1     G D K C R Y L H C W S K G E S F A L L T Q L D G H E K L V S G I A L P S G S D K L Y T G S K D E T L R V W D C A S G Q C
pp024263_Pp1s20    G D T C N F L H A H T T A P D M E M T T V L N G H E K A V R A I V L P E A H A Q L Y T G S Q D E S V R V W D C T T G K C
 
AT5G51980.1     T G V L K L G G E I G C V L S E G P W L L V G M P N L V K A W N I E T N A D Q S L S G P V G Q V Y S L V V G T D - L L F
pp024263_Pp1s20    T N V A P M G G D V G A L I F A K G W L F V G L P N E V K V I N M A T L Q Q A N L S G P K G Q V H A L A V T D D G L L F
 
AT5G51980.1     A G T Q D G S I L A W R Y N A A T N C F E P S A S L T G H T L A V V T L Y V G A N R L Y S G S M D K T I K V W S L D N L
pp024263_Pp1s20    A G T H D G T I L I W Q F N A A T N Q F E P A A S M S G H T G P V V T L M L I A N R L Y S G S M D S T I R V W E F A T L
 
AT5G51980.1     Q C I Q T L T D H S S V V M S L I C W D Q F L L S C S L D N T V K I W A A I E G G N L E V T Y T H K E E H - - - - - - -
pp024263_Pp1s20    Q C V Q A L E G H T N V V M D L L C W D S F L L S C S L D G T I K I W S V N S S G Q L E L T F S H P E E E N Q S D S R N
 
AT5G51980.1     - - - - G V L A L C G V H D A E A K P V L L C A C N D N T L R L Y D L P S F T E R G K I F A K Q E I R A I Q I G P G G I
pp024263_Pp1s20    I T L A G A L K M C G C T D K A G K P V L L C S Y N D N I V R L Y D L P T F T E R G Q L F S R E E V R A L Q V G L N N L
 
AT5G51980.1     F F T G D G T G Q V K V W K W C - T E P T A A L P
pp024263_Pp1s20    V F S G D S R G D V K V W S W I D T H P E A V V N
 
0