fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026344 not found in 454aa AT4G25440.1 not_not 0.689461883 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51980.1     MDFDLNGG-----NKRVFNRLGGGGGSTRPMAPTDT--------RQKVCFHWRAGRCNRS
pt026344_POPTR_ MDFDYNGGNTTNTNKRVFNRLGGG------QSANDTSNHNHLQQNQKVCYHWRAGRCNRF
                **** ***     ***********       :..**        .****:********* 

AT5G51980.1     PCPYLHRELPGPGPGQGQGPGYTNKR--VAEESGFAGPSHRRG----PGFNGNSSSSWGR
pt026344_POPTR_ PCPFLHRELSAPPTHAAVNGGVGAKRGFVGNDSSSSSFSGRRGNNGTNGNNSNYSNSWGR
                ***:*****..* .  . . *   **  *.::*. :. * ***     * *.* *.****

AT5G51980.1     FGGN---RTVT--KTEKVCNFWVDGNCTYGDKCRYLHCWSKGESFALLTQLDGHEKLVSG
pt026344_POPTR_ FGNKGDGRGVRGGSVEKVCTYWVQGHCNRGDTCRFLHSWSLGDGFSLLTQLEGHQKVISG
                **.:   * *   ..****.:**:*:*. **.**:**.** *:.*:*****:**:*::**

AT5G51980.1     IALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLSEGPWLLVGMPNLVKAW
pt026344_POPTR_ IALPSGSDKLYTGSKDETVRVWDCQSGQCMGVINLGGEVGCMISEGPWIFVGTPNVVKAW
                ******************:***** **** **::****:**::*****::** **:****

AT5G51980.1     NIETNADQSLSGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLA
pt026344_POPTR_ NTQTNTDLSLTGPVGQVYTLVVGNDLLFAGTQDGSILVWKFNAATYNFEPAASLNDHKMA
                * :**:* **:*******:****.*************.*::****  ***:***..*.:*

AT5G51980.1     VVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQFLLSCSLDNTV
pt026344_POPTR_ VVSLVVGANRLYSGSMDHSIKVWSLETLQCVQTLKDHTSVVMSLLCWEQFLLSCSLDQTI
                **:* ************::******:.***:***.**:******:**:*********:*:

AT5G51980.1     KIWAAIEGGNLEVTYTHKEEHGVLALCGVHDAEAKPVLLCACNDNTLRLYDLPSFTERGK
pt026344_POPTR_ KVWAATESGNLEVTYTHKEEHGLLTLCGMHDLEGKPILLCSSNDSSVHLFDLPSFSEKGK
                *:*** *.**************:*:***:** *.**:***:.**.:::*:*****:*:**

AT5G51980.1     IFAKQEIRAIQIGPGGIFFTGDGTGQVKVWKWCTEPTAALP
pt026344_POPTR_ IFAKQEIRAIQTGPGGLFFTGDGTGQVRVWNSVAVPTATT-
                *********** ****:**********:**:  : ***:
BoxShade v3.31 C (beta, 970507) Output
AT5G51980.1     M D F D L N G G - - - - - N K R V F N R L G G G G G S T R P M A P T D T - - - - - - - - R Q K V C F H W R A G R C N R S
pt026344_POPTR_    M D F D Y N G G N T T N T N K R V F N R L G G G - - - - - - Q S A N D T S N H N H L Q Q N Q K V C Y H W R A G R C N R F
 
AT5G51980.1     P C P Y L H R E L P G P G P G Q G Q G P G Y T N K R - - V A E E S G F A G P S H R R G - - - - P G F N G N S S S S W G R
pt026344_POPTR_    P C P F L H R E L S A P P T H A A V N G G V G A K R G F V G N D S S S S S F S G R R G N N G T N G N N S N Y S N S W G R
 
AT5G51980.1     F G G N - - - R T V T - - K T E K V C N F W V D G N C T Y G D K C R Y L H C W S K G E S F A L L T Q L D G H E K L V S G
pt026344_POPTR_    F G N K G D G R G V R G G S V E K V C T Y W V Q G H C N R G D T C R F L H S W S L G D G F S L L T Q L E G H Q K V I S G
 
AT5G51980.1     I A L P S G S D K L Y T G S K D E T L R V W D C A S G Q C T G V L K L G G E I G C V L S E G P W L L V G M P N L V K A W
pt026344_POPTR_    I A L P S G S D K L Y T G S K D E T V R V W D C Q S G Q C M G V I N L G G E V G C M I S E G P W I F V G T P N V V K A W
 
AT5G51980.1     N I E T N A D Q S L S G P V G Q V Y S L V V G T D L L F A G T Q D G S I L A W R Y N A A T N C F E P S A S L T G H T L A
pt026344_POPTR_    N T Q T N T D L S L T G P V G Q V Y T L V V G N D L L F A G T Q D G S I L V W K F N A A T Y N F E P A A S L N D H K M A
 
AT5G51980.1     V V T L Y V G A N R L Y S G S M D K T I K V W S L D N L Q C I Q T L T D H S S V V M S L I C W D Q F L L S C S L D N T V
pt026344_POPTR_    V V S L V V G A N R L Y S G S M D H S I K V W S L E T L Q C V Q T L K D H T S V V M S L L C W E Q F L L S C S L D Q T I
 
AT5G51980.1     K I W A A I E G G N L E V T Y T H K E E H G V L A L C G V H D A E A K P V L L C A C N D N T L R L Y D L P S F T E R G K
pt026344_POPTR_    K V W A A T E S G N L E V T Y T H K E E H G L L T L C G M H D L E G K P I L L C S S N D S S V H L F D L P S F S E K G K
 
AT5G51980.1     I F A K Q E I R A I Q I G P G G I F F T G D G T G Q V K V W K W C T E P T A A L P
pt026344_POPTR_    I F A K Q E I R A I Q T G P G G L F F T G D G T G Q V R V W N S V A V P T A T T -
 
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