fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045275 not found in 427aa AT4G25440.1 1st_not 0.681614349 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51980.1     MDFDLNGGNKRVFNRLGGGGGSTRPMAPTDTRQKVCFHWRAGRCNRSPCPYLHRELPGPG
gm045275_Glyma1 --MDVDGGNKRVYNRLGGDA----------KHQKVCFHWQAGKCNRYPCPFLHSELPA--
                  :*::******:*****..          .:*******:**:*** ***:** ***.  

AT5G51980.1     PGQGQGPGYTNKRVAEESGFAGPSHRRGPGFNGNSSSSWGRFGGNR------------TV
gm045275_Glyma1 -NSHHANGASSKRAYDNSGFSGP--RRSPSFN----NTWGR-GGSRGGGGAGAGAGRGVV
                 .. :. * :.**. ::***:**  **.*.**    .:*** **.*            .*

AT5G51980.1     TKTEKVCNFWVDGNCTYGDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYT
gm045275_Glyma1 VKAEKVCNYWIQGNCSYGERCKFLHTWSVGDGFSLLTQLEGHQKAVSAIAFPSGSDKLYT
                .*:*****:*::***:**::*::** ** *:.*:*****:**:* **.**:*********

AT5G51980.1     GSKDETLRVWDCASGQCTGVLKLGGEIGCVLSEGPWLLVGMPNLVKAWNIETNADQSLSG
gm045275_Glyma1 GSTDETARIWDCQSGKCVGVINLGGEVGCMISEGPWVFVGIPNFVKAWNTQNLSELSLNG
                **.*** *:*** **:*.**::****:**::*****::**:**:***** :. :: **.*

AT5G51980.1     PVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLY
gm045275_Glyma1 PVGQVYALVVNNDMLFAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLY
                ******:***..*:*************::*.*******:***.**: .**:* *******

AT5G51980.1     SGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLE
gm045275_Glyma1 SGSMDNTIRVWNLETLQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLE
                *****:**:**.*:.***:****:*:*****::************:***:* * *.****

AT5G51980.1     VTYTHKEEHGVLALCGVHDAEAKPVLLCACNDNTLRLYDLPSFTERGKIFAKQEIRAIQI
gm045275_Glyma1 VTYTHNEENGILTLCGMHDSQGKPILLCACNDNTVHLYDLPSFAERGKILTKKEVRAIQI
                *****:**:*:*:***:**::.**:*********::*******:*****::*:*:*****

AT5G51980.1     GPGGIFFTGDGTGQVKVWKWCTEPTAALP
gm045275_Glyma1 GPNGIFFTGDGTGEVRVWNWIAEATTTTQ
                **.**********:*:**:* :*.*::
BoxShade v3.31 C (beta, 970507) Output
AT5G51980.1     M D F D L N G G N K R V F N R L G G G G G S T R P M A P T D T R Q K V C F H W R A G R C N R S P C P Y L H R E L P G P G
gm045275_Glyma1    - - M D V D G G N K R V Y N R L G G D A - - - - - - - - - - K H Q K V C F H W Q A G K C N R Y P C P F L H S E L P A - -
 
AT5G51980.1     P G Q G Q G P G Y T N K R V A E E S G F A G P S H R R G P G F N G N S S S S W G R F G G N R - - - - - - - - - - - - T V
gm045275_Glyma1    - N S H H A N G A S S K R A Y D N S G F S G P - - R R S P S F N - - - - N T W G R - G G S R G G G G A G A G A G R G V V
 
AT5G51980.1     T K T E K V C N F W V D G N C T Y G D K C R Y L H C W S K G E S F A L L T Q L D G H E K L V S G I A L P S G S D K L Y T
gm045275_Glyma1    V K A E K V C N Y W I Q G N C S Y G E R C K F L H T W S V G D G F S L L T Q L E G H Q K A V S A I A F P S G S D K L Y T
 
AT5G51980.1     G S K D E T L R V W D C A S G Q C T G V L K L G G E I G C V L S E G P W L L V G M P N L V K A W N I E T N A D Q S L S G
gm045275_Glyma1    G S T D E T A R I W D C Q S G K C V G V I N L G G E V G C M I S E G P W V F V G I P N F V K A W N T Q N L S E L S L N G
 
AT5G51980.1     P V G Q V Y S L V V G T D L L F A G T Q D G S I L A W R Y N A A T N C F E P S A S L T G H T L A V V T L Y V G A N R L Y
gm045275_Glyma1    P V G Q V Y A L V V N N D M L F A G T Q D G S I L A W K F N V A T N C F E P A A S L K G H S R G V V S L V V G A N R L Y
 
AT5G51980.1     S G S M D K T I K V W S L D N L Q C I Q T L T D H S S V V M S L I C W D Q F L L S C S L D N T V K I W A A I E G G N L E
gm045275_Glyma1    S G S M D N T I R V W N L E T L Q C L Q T L T E H T S V V M S V L C W D Q F L L S C S L D K T V K V W Y A T E S G N L E
 
AT5G51980.1     V T Y T H K E E H G V L A L C G V H D A E A K P V L L C A C N D N T L R L Y D L P S F T E R G K I F A K Q E I R A I Q I
gm045275_Glyma1    V T Y T H N E E N G I L T L C G M H D S Q G K P I L L C A C N D N T V H L Y D L P S F A E R G K I L T K K E V R A I Q I
 
AT5G51980.1     G P G G I F F T G D G T G Q V K V W K W C T E P T A A L P
gm045275_Glyma1    G P N G I F F T G D G T G E V R V W N W I A E A T T T T Q
 
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