fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51990.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm054799 not found in 207aa AT4G25480.1 not_not 0.421333333 III
Pt029157 not found in 231aa AT4G25490.1 not_not 0.474666666 III
Pt029739 not found in 213aa AT4G25480.1 not_not 0.437333333 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G51990.1     MNPFYSTFPDSFLSISDH---RSPVSDSSEC---SPK-------LASSCPKKRAGRKKFR
gm054799_Glyma2 ------MFSINHFSDPDA---TSPGSGGSS----RPALSDEDFFLAASNPKKRAGRKKFR
pt029739_POPTR_ -----------MPNDRQE---ASSFSDSSTSRR-VVH-SDEEVLLATSFPKKRAGRRIFR
pt029157_POPTR_ ---MVMGGSNSFSPDKQESSLSSLLSDSSGSQQDSPS-SNEKVLLATSRPKKRAGRRIFK
                                :     *  *..*               **:* *******: *:

AT5G51990.1     ETRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACL
gm054799_Glyma2 ETRHPVYRGVRRRDSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGRSACL
pt029739_POPTR_ ETRHPVFRGVRKRNGNKWVCEMREPNKKSRIWLGTYPTPEMAARAHDVAALALRGKSACL
pt029157_POPTR_ ETRHPIFRGVRKRNGDKWVCELREPNKKSRIWLGTYPTPEMAARAHDVAALAFRGKSACL
                *****::****:*:..*****:*************:** ***********:*:**:****

AT5G51990.1     NFADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERR
gm054799_Glyma2 NFADSASRLPVPATAEARDIQKAAAEAAEAFR-----PGKDDDAVAERVAATAT---ERE
pt029739_POPTR_ NFADSAWRLPVPVSKDSKDITRAANEAAELFR-------------PQEFGGHPA----KQ
pt029157_POPTR_ NFADSAWRLPVPISNEAKDIRRAASEAAELFR-------------TSDLGGQVMED-FRR
                ****** ** :* :  .::* :** ***  *:             ..  ..       :.

AT5G51990.1     AE------EQNGGVF--------YMDDEALLGMPNFFENMAEGMLLPPP------EVGWN
gm054799_Glyma2 EE------QEEGMV-------------------PEYLRNM---VLMSPTHCFGSDEYGSA
pt029739_POPTR_ QD------SNAEAVFAMPGENDVFF-EEAVFDMPGLLVDMAEGLLLSPPRYV---RNDCN
pt029157_POPTR_ EDRGEVRSSTNDDIRDLPSENVGYIDEEAEFNMPGLLASMAEGLLLSPPHYT----GDWN
                 :      .    :                   *  : .*   :*:.*.        .  

AT5G51990.1     HND-FDGVGDVSLWSFDE
gm054799_Glyma2 DVE-FDD-AEVSLWSYSI
pt029739_POPTR_ DLDHMENGSDLSLWSY--
pt029157_POPTR_ D---GEIDADWSLWSS--
                .    :  .: ****
BoxShade v3.31 C (beta, 970507) Output
AT5G51990.1     M N P F Y S T F P D S F L S I S D H - - - R S P V S D S S E C - - - S P K - - - - - - - L A S S C P K K R A G R K K F R
gm054799_Glyma2    - - - - - - M F S I N H F S D P D A - - - T S P G S G G S S - - - - R P A L S D E D F F L A A S N P K K R A G R K K F R
pt029739_POPTR_    - - - - - - - - - - - M P N D R Q E - - - A S S F S D S S T S R R - V V H - S D E E V L L A T S F P K K R A G R R I F R
pt029157_POPTR_    - - - M V M G G S N S F S P D K Q E S S L S S L L S D S S G S Q Q D S P S - S N E K V L L A T S R P K K R A G R R I F K
 
AT5G51990.1     E T R H P I Y R G V R Q R N S G K W V C E V R E P N K K S R I W L G T F P T V E M A A R A H D V A A L A L R G R S A C L
gm054799_Glyma2    E T R H P V Y R G V R R R D S G K W V C E V R E P N K K S R I W L G T F P T A E M A A R A H D V A A I A L R G R S A C L
pt029739_POPTR_    E T R H P V F R G V R K R N G N K W V C E M R E P N K K S R I W L G T Y P T P E M A A R A H D V A A L A L R G K S A C L
pt029157_POPTR_    E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L G T Y P T P E M A A R A H D V A A L A F R G K S A C L
 
AT5G51990.1     N F A D S A W R L R I P E T T C P K E I Q K A A S E A A M A F Q N E T T T E G S K T A A E A E E A A G E G V R E G E R R
gm054799_Glyma2    N F A D S A S R L P V P A T A E A R D I Q K A A A E A A E A F R - - - - - P G K D D D A V A E R V A A T A T - - - E R E
pt029739_POPTR_    N F A D S A W R L P V P V S K D S K D I T R A A N E A A E L F R - - - - - - - - - - - - - P Q E F G G H P A - - - - K Q
pt029157_POPTR_    N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R - - - - - - - - - - - - - T S D L G G Q V M E D - F R R
 
AT5G51990.1     A E - - - - - - E Q N G G V F - - - - - - - - Y M D D E A L L G M P N F F E N M A E G M L L P P P - - - - - - E V G W N
gm054799_Glyma2    E E - - - - - - Q E E G M V - - - - - - - - - - - - - - - - - - - P E Y L R N M - - - V L M S P T H C F G S D E Y G S A
pt029739_POPTR_    Q D - - - - - - S N A E A V F A M P G E N D V F F - E E A V F D M P G L L V D M A E G L L L S P P R Y V - - - R N D C N
pt029157_POPTR_    E D R G E V R S S T N D D I R D L P S E N V G Y I D E E A E F N M P G L L A S M A E G L L L S P P H Y T - - - - G D W N
 
AT5G51990.1     H N D - F D G V G D V S L W S F D E
gm054799_Glyma2    D V E - F D D - A E V S L W S Y S I
pt029739_POPTR_    D L D H M E N G S D L S L W S Y - -
pt029157_POPTR_    D - - - G E I D A D W S L W S S - -
 
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