fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51990.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024920 not found in 234aa AT5G51990.1 1st_1st 0.466666666 Ia
Pt023286 not found in 255aa AT5G51990.1 1st_1st 0.546666666 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G51990.1     --------------MNPFYSTFPDSFLSISDHR---SP-VSDSSECSP------------
gm024920_Glyma0 MFTLNH--------SSDLYHV---------------SPELSSSLDTSSPASEGSRGVAFS
pt023286_POPTR_ MDLFSHYSDPSPFGATDFWSVFNENN-GINQEQCSYSPVLSDSSISSNVTTRVQPAPNFS
                               . :: .               ** :*.*   *             

AT5G51990.1     ----KLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTV
gm024920_Glyma0 DEEVRLAVRHPKKRAGRKKFRETRHPVYRGVRRRNSDKWVCEVREPNKKTRIWLGTFPTP
pt023286_POPTR_ DEEVMLASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTA
                     **   ****************:*****:***.************:********* 

AT5G51990.1     EMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTT--
gm024920_Glyma0 EMAARAHDVAAMALRGRYACLNFADSAWRLPVPATAEAKDIQKAAAEAAQAFRPD-----
pt023286_POPTR_ EMAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRPEGCVGG
                ***********:***** ************ :* :: .*:*****:*** .*: :     

AT5G51990.1     EGSKTAAEAEE---AAGEGVREGERRAEEQNGGVFYM-DDEALLGMPNFFENMAEGMLLP
gm024920_Glyma0 QTLKNANTRQECVEAVAVAVAETTTATAQ---GVFYMEEEEQVLDMPELLRNM---VLMS
pt023286_POPTR_ ELMRTGDEGEK--------AAETTAEAGE---EVFYM-DDEAVFGMPGLLANMAEGMLLP
                :  :..   ::        . *    : :    **** ::* ::.** :: **   :*:.

AT5G51990.1     PPEV---GWNHNDFDGV-GDVSLWSFDE
gm024920_Glyma0 PTHCLGYEYEDADLDAQDAEVSLWNFSI
pt023286_POPTR_ PPHCGGGGDGWDNMENIDADMPLWSFSI
                *..         :::   .::.**.*.
BoxShade v3.31 C (beta, 970507) Output
AT5G51990.1     - - - - - - - - - - - - - - M N P F Y S T F P D S F L S I S D H R - - - S P - V S D S S E C S P - - - - - - - - - - - -
gm024920_Glyma0    M F T L N H - - - - - - - - S S D L Y H V - - - - - - - - - - - - - - - S P E L S S S L D T S S P A S E G S R G V A F S
pt023286_POPTR_    M D L F S H Y S D P S P F G A T D F W S V F N E N N - G I N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F S
 
AT5G51990.1     - - - - K L A S S C P K K R A G R K K F R E T R H P I Y R G V R Q R N S G K W V C E V R E P N K K S R I W L G T F P T V
gm024920_Glyma0    D E E V R L A V R H P K K R A G R K K F R E T R H P V Y R G V R R R N S D K W V C E V R E P N K K T R I W L G T F P T P
pt023286_POPTR_    D E E V M L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A
 
AT5G51990.1     E M A A R A H D V A A L A L R G R S A C L N F A D S A W R L R I P E T T C P K E I Q K A A S E A A M A F Q N E T T T - -
gm024920_Glyma0    E M A A R A H D V A A M A L R G R Y A C L N F A D S A W R L P V P A T A E A K D I Q K A A A E A A Q A F R P D - - - - -
pt023286_POPTR_    E M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P E G C V G G
 
AT5G51990.1     E G S K T A A E A E E - - - A A G E G V R E G E R R A E E Q N G G V F Y M - D D E A L L G M P N F F E N M A E G M L L P
gm024920_Glyma0    Q T L K N A N T R Q E C V E A V A V A V A E T T T A T A Q - - - G V F Y M E E E E Q V L D M P E L L R N M - - - V L M S
pt023286_POPTR_    E L M R T G D E G E K - - - - - - - - A A E T T A E A G E - - - E V F Y M - D D E A V F G M P G L L A N M A E G M L L P
 
AT5G51990.1     P P E V - - - G W N H N D F D G V - G D V S L W S F D E
gm024920_Glyma0    P T H C L G Y E Y E D A D L D A Q D A E V S L W N F S I
pt023286_POPTR_    P P H C G G G G D G W D N M E N I D A D M P L W S F S I
 
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