fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51990.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026202 not found in 248aa AT5G51990.1 not_1st 0.525333333 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51990.1     ---------MNPFYSTFPDSFLSISD-----HRSPVSDSSECSPK---------------
pt026202_POPTR_ MDVFCSYSDQNPIGSM---SLLSVLDEQECSYSSVLSDSSITSSVTKGVQPGAIFSDEEV
                          **: *    *:**: *     : * :****  *.                

AT5G51990.1     -LASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAA
pt026202_POPTR_ ILASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTADMAA
                 ***  ****************:*****:**************************.:***

AT5G51990.1     RAHDVAALALRGRSACLNFADSAWRLRIPETTCPKEIQKAASEAAMAFQNETT--TEGSK
pt026202_POPTR_ RAHDVAALALRGRSACLNFADSAWRLPTPASSDAKDIQKAAAEAAEAFRPEGSLGVELTR
                **************************  * :: .*:*****:*** **: * :  .* ::

AT5G51990.1     TAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPE-VGWN
pt026202_POPTR_ TGDEVEKVAGTAA-----------GDVFYMDDDADFGMPGLLANIAEGMLLPPPNCCGYS
                *. *.*:.** ..           *.******:* :***.:: *:*********:  *:.

AT5G51990.1     HND-FDGV----GDVSLWSFDE
pt026202_POPTR_ GGDSLDNMENNDTDMSLWSFSV
                 .* :*.:     *:*****.
BoxShade v3.31 C (beta, 970507) Output
AT5G51990.1     - - - - - - - - - M N P F Y S T F P D S F L S I S D - - - - - H R S P V S D S S E C S P K - - - - - - - - - - - - - - -
pt026202_POPTR_    M D V F C S Y S D Q N P I G S M - - - S L L S V L D E Q E C S Y S S V L S D S S I T S S V T K G V Q P G A I F S D E E V
 
AT5G51990.1     - L A S S C P K K R A G R K K F R E T R H P I Y R G V R Q R N S G K W V C E V R E P N K K S R I W L G T F P T V E M A A
pt026202_POPTR_    I L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A D M A A
 
AT5G51990.1     R A H D V A A L A L R G R S A C L N F A D S A W R L R I P E T T C P K E I Q K A A S E A A M A F Q N E T T - - T E G S K
pt026202_POPTR_    R A H D V A A L A L R G R S A C L N F A D S A W R L P T P A S S D A K D I Q K A A A E A A E A F R P E G S L G V E L T R
 
AT5G51990.1     T A A E A E E A A G E G V R E G E R R A E E Q N G G V F Y M D D E A L L G M P N F F E N M A E G M L L P P P E - V G W N
pt026202_POPTR_    T G D E V E K V A G T A A - - - - - - - - - - - G D V F Y M D D D A D F G M P G L L A N I A E G M L L P P P N C C G Y S
 
AT5G51990.1     H N D - F D G V - - - - G D V S L W S F D E
pt026202_POPTR_    G G D S L D N M E N N D T D M S L W S F S V
 
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