fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51990.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029157 not found in 231aa AT4G25490.1 not_not 0.474666666 III
Pt029739 not found in 213aa AT4G25480.1 not_not 0.437333333 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G51990.1     --------MNP------FYSTFPDSFLSISDHRSPVSDSSECSPKLASSCPKKRAGRKKF
pt029157_POPTR_ MVMGGSNSFSPDKQESSLSSLLSDS--SGSQQDSPSSNEKVL---LATSRPKKRAGRRIF
pt029739_POPTR_ --------MPNDRQE---ASSFSDS--STSRR-VVHSDEEVL---LATSFPKKRAGRRIF
                        :          * :.**  * * :    *:..     **:* *******: *

AT5G51990.1     RETRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSAC
pt029157_POPTR_ KETRHPIFRGVRKRNGDKWVCELREPNKKSRIWLGTYPTPEMAARAHDVAALAFRGKSAC
pt029739_POPTR_ RETRHPVFRGVRKRNGNKWVCEMREPNKKSRIWLGTYPTPEMAARAHDVAALALRGKSAC
                :*****::****:**..*****:*************:** *************:**:***

AT5G51990.1     LNFADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAE-AEEAAGE---GVR
pt029157_POPTR_ LNFADSAWRLPVPISNEAKDIRRAASEAAELFR--TSDLGGQVMEDFRREDRGEVRSSTN
pt029739_POPTR_ LNFADSAWRLPVPVSKDSKDITRAANEAAELFR--PQEFGGHPA---KQQD------SNA
                ********** :* :. .*:* :**.***  *:  .   *.:      .:       .  

AT5G51990.1     EGERRAEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVG-WNHND---FDGVGDVS
pt029157_POPTR_ DDIRDLPSENVG--YIDEEAEFNMPGLLASMAEGLLLSPPHYT-GDWND---GEIDADWS
pt029739_POPTR_ EAVFAMPGENDV--FF-EEAVFDMPGLLVDMAEGLLLSPPRYVRNDCNDLDHMENGSDLS
                :       :*    :: :** :.**.:: .****:**.**.    : **    :  .* *

AT5G51990.1     LWSFDE
pt029157_POPTR_ LWSS--
pt029739_POPTR_ LWSY--
                ***
BoxShade v3.31 C (beta, 970507) Output
AT5G51990.1     - - - - - - - - M N P - - - - - - F Y S T F P D S F L S I S D H R S P V S D S S E C S P K L A S S C P K K R A G R K K F
pt029157_POPTR_    M V M G G S N S F S P D K Q E S S L S S L L S D S - - S G S Q Q D S P S S N E K V L - - - L A T S R P K K R A G R R I F
pt029739_POPTR_    - - - - - - - - M P N D R Q E - - - A S S F S D S - - S T S R R - V V H S D E E V L - - - L A T S F P K K R A G R R I F
 
AT5G51990.1     R E T R H P I Y R G V R Q R N S G K W V C E V R E P N K K S R I W L G T F P T V E M A A R A H D V A A L A L R G R S A C
pt029157_POPTR_    K E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L G T Y P T P E M A A R A H D V A A L A F R G K S A C
pt029739_POPTR_    R E T R H P V F R G V R K R N G N K W V C E M R E P N K K S R I W L G T Y P T P E M A A R A H D V A A L A L R G K S A C
 
AT5G51990.1     L N F A D S A W R L R I P E T T C P K E I Q K A A S E A A M A F Q N E T T T E G S K T A A E - A E E A A G E - - - G V R
pt029157_POPTR_    L N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R - - T S D L G G Q V M E D F R R E D R G E V R S S T N
pt029739_POPTR_    L N F A D S A W R L P V P V S K D S K D I T R A A N E A A E L F R - - P Q E F G G H P A - - - K Q Q D - - - - - - S N A
 
AT5G51990.1     E G E R R A E E Q N G G V F Y M D D E A L L G M P N F F E N M A E G M L L P P P E V G - W N H N D - - - F D G V G D V S
pt029157_POPTR_    D D I R D L P S E N V G - - Y I D E E A E F N M P G L L A S M A E G L L L S P P H Y T - G D W N D - - - G E I D A D W S
pt029739_POPTR_    E A V F A M P G E N D V - - F F - E E A V F D M P G L L V D M A E G L L L S P P R Y V R N D C N D L D H M E N G S D L S
 
AT5G51990.1     L W S F D E
pt029157_POPTR_    L W S S - -
pt029739_POPTR_    L W S Y - -
 
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