fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51990.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm054799 not found in 207aa AT4G25480.1 not_not 0.421333333 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51990.1     MNPFYSTFPDSFLSISDHRSPVSDSSECSPK-------LASSCPKKRAGRKKFRETRHPI
gm054799_Glyma2 ------MFSINHFSDPDATSPGSGGSS-RPALSDEDFFLAASNPKKRAGRKKFRETRHPV
                       *. ..:* .*  ** *..*.  *        **:* ****************:

AT5G51990.1     YRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSA
gm054799_Glyma2 YRGVRRRDSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSA
                *****:*:************************.***********:***************

AT5G51990.1     WRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNG
gm054799_Glyma2 SRLPVPATAEARDIQKAAAEAAEAFR-----PGKDDDAVAERVAATAT---EREEEQEEG
                 ** :* *: .::*****:*** **:      *..  * **..*. ..   **. *:::*

AT5G51990.1     GVFYMDDEALLGMPNFFENMAEGMLLPPP------EVGWNHNDFDGVGDVSLWSFDE
gm054799_Glyma2 MV-----------PEYLRNM---VLMSPTHCFGSDEYGSADVEFDD-AEVSLWSYSI
                 *           *:::.**   :*:.*.      * *  . :**. .:*****:.
BoxShade v3.31 C (beta, 970507) Output
AT5G51990.1     M N P F Y S T F P D S F L S I S D H R S P V S D S S E C S P K - - - - - - - L A S S C P K K R A G R K K F R E T R H P I
gm054799_Glyma2    - - - - - - M F S I N H F S D P D A T S P G S G G S S - R P A L S D E D F F L A A S N P K K R A G R K K F R E T R H P V
 
AT5G51990.1     Y R G V R Q R N S G K W V C E V R E P N K K S R I W L G T F P T V E M A A R A H D V A A L A L R G R S A C L N F A D S A
gm054799_Glyma2    Y R G V R R R D S G K W V C E V R E P N K K S R I W L G T F P T A E M A A R A H D V A A I A L R G R S A C L N F A D S A
 
AT5G51990.1     W R L R I P E T T C P K E I Q K A A S E A A M A F Q N E T T T E G S K T A A E A E E A A G E G V R E G E R R A E E Q N G
gm054799_Glyma2    S R L P V P A T A E A R D I Q K A A A E A A E A F R - - - - - P G K D D D A V A E R V A A T A T - - - E R E E E Q E E G
 
AT5G51990.1     G V F Y M D D E A L L G M P N F F E N M A E G M L L P P P - - - - - - E V G W N H N D F D G V G D V S L W S F D E
gm054799_Glyma2    M V - - - - - - - - - - - P E Y L R N M - - - V L M S P T H C F G S D E Y G S A D V E F D D - A E V S L W S Y S I
 
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