fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G51990.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024920 not found in 234aa AT5G51990.1 1st_1st 0.466666666 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G51990.1     ------MNPFYSTFPDSFLSIS-DHRSPVSDS------SECSPKLASSCPKKRAGRKKFR
gm024920_Glyma0 MFTLNHSSDLYHVSPE--LSSSLDTSSPASEGSRGVAFSDEEVRLAVRHPKKRAGRKKFR
                       . :* . *:  ** * *  **.*:.      *: . :**   ***********

AT5G51990.1     ETRHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACL
gm024920_Glyma0 ETRHPVYRGVRRRNSDKWVCEVREPNKKTRIWLGTFPTPEMAARAHDVAAMALRGRYACL
                *****:*****:***.************:********* ***********:***** ***

AT5G51990.1     NFADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERR
gm024920_Glyma0 NFADSAWRLPVPATAEAKDIQKAAAEAAQAFRPDQTLKNANTRQECVEAVAVAVAETTTA
                ********* :* *: .*:*****:*** **: : * :.::*  *. **.. .* *    

AT5G51990.1     AEEQNGGVFYM-DDEALLGMPNFFENMAEGMLLPPPEVGWNHNDFD---GVGDVSLWSFD
gm024920_Glyma0 TAQ---GVFYMEEEEQVLDMPELLRNMV--LMSPTHCLGYEYEDADLDAQDAEVSLWNFS
                : :   ***** ::* :*.**:::.**.  :: *.  :*::::* *     .:****.*.

AT5G51990.1     E
gm024920_Glyma0 I
BoxShade v3.31 C (beta, 970507) Output
AT5G51990.1     - - - - - - M N P F Y S T F P D S F L S I S - D H R S P V S D S - - - - - - S E C S P K L A S S C P K K R A G R K K F R
gm024920_Glyma0    M F T L N H S S D L Y H V S P E - - L S S S L D T S S P A S E G S R G V A F S D E E V R L A V R H P K K R A G R K K F R
 
AT5G51990.1     E T R H P I Y R G V R Q R N S G K W V C E V R E P N K K S R I W L G T F P T V E M A A R A H D V A A L A L R G R S A C L
gm024920_Glyma0    E T R H P V Y R G V R R R N S D K W V C E V R E P N K K T R I W L G T F P T P E M A A R A H D V A A M A L R G R Y A C L
 
AT5G51990.1     N F A D S A W R L R I P E T T C P K E I Q K A A S E A A M A F Q N E T T T E G S K T A A E A E E A A G E G V R E G E R R
gm024920_Glyma0    N F A D S A W R L P V P A T A E A K D I Q K A A A E A A Q A F R P D Q T L K N A N T R Q E C V E A V A V A V A E T T T A
 
AT5G51990.1     A E E Q N G G V F Y M - D D E A L L G M P N F F E N M A E G M L L P P P E V G W N H N D F D - - - G V G D V S L W S F D
gm024920_Glyma0    T A Q - - - G V F Y M E E E E Q V L D M P E L L R N M V - - L M S P T H C L G Y E Y E D A D L D A Q D A E V S L W N F S
 
AT5G51990.1     E
gm024920_Glyma0    I
 
0