fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047989 not found in 330aa AT5G52010.1 not_1st 0.556962025 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G52010.1     ----MSLFCNSIETLYPKPFLSHKSHFFTFSNSKFQNPKFTSFPLRHQWRIESCL--KSA
gm047989_Glyma1 MITLPSIPLTTITTTKPFP---HNRH----------------FP-----RIQCCSNNNNN
                     *:  .:* *  * *   *: *                **     **:.*   :. 

AT5G52010.1     SSSEIDMVRNKEGIFAPKEKKVVVLWDLDNKPPRGPPYEAATALRKVAEKLGRVVEISAY
gm047989_Glyma1 NSIEIDMVKNSQGIYAPKASKVVVLWDLDNKPPRGPPYDVAISLKTLAARFGDLVDFSAY
                .* *****:*.:**:*** .******************:.* :*:.:* ::* :*::***

AT5G52010.1     ANRHAFIHLPHWVVEERRERRNLDFMERKGEVTPIDPYICGVCGRKCKTNLDLKKHFKQL
gm047989_Glyma1 ANRHAFVHLPQWVLQQRRDRKNLDILERKGIITPPEPYTCGVCGRKCKTHLDLKKHFKQL
                ******:***:**:::**:*:***::**** :** :** **********:**********

AT5G52010.1     HERERQKKVNRMRSLKGKKRQKFKERYVSGNEKYNEAARSLLTPKVGYGLEAELRRAGVY
gm047989_Glyma1 HQRERQKKLNRLKSLKGKKRHRFKERFLRGNHKYDDAARTLVVPKVGYGLAAELRRAGVF
                *:******:**::*******::****:: **.**::***:*:.******* ********:

AT5G52010.1     VKTVEDKPQAADWAVKRQIQHSMTRGIDWLVLVSDDKDFSDMLRKAREADLGTLVVSDMD
gm047989_Glyma1 VKTVQDKPQAADWALKRQMVHSMSRGIDWLFLVSDDSDFSEMLRRAREADLGTVVVGDWD
                ****:*********:***: ***:******.*****.***:***:********:**.* *

AT5G52010.1     RALGRHADLWVPWSGVEKGEIGEKDLIPGKRPRFEEDEVGFGGNDELFSLSYDEDEKAEM
gm047989_Glyma1 RALGRHADLWVPWSGVENGEVG--DLVPKRR---------------------RENSRRRE
                *****************:**:*  **:* :*                      *:.: . 

AT5G52010.1     TVESDGFGRFNVSAFSEDEWVEDEGDFVLSDSSDDDSDDELF
gm047989_Glyma1 QGEEHGFG------------LED----------DDDDDD---
                  *..***            :**          ***.**
BoxShade v3.31 C (beta, 970507) Output
AT5G52010.1     - - - - M S L F C N S I E T L Y P K P F L S H K S H F F T F S N S K F Q N P K F T S F P L R H Q W R I E S C L - - K S A
gm047989_Glyma1    M I T L P S I P L T T I T T T K P F P - - - H N R H - - - - - - - - - - - - - - - - F P - - - - - R I Q C C S N N N N N
 
AT5G52010.1     S S S E I D M V R N K E G I F A P K E K K V V V L W D L D N K P P R G P P Y E A A T A L R K V A E K L G R V V E I S A Y
gm047989_Glyma1    N S I E I D M V K N S Q G I Y A P K A S K V V V L W D L D N K P P R G P P Y D V A I S L K T L A A R F G D L V D F S A Y
 
AT5G52010.1     A N R H A F I H L P H W V V E E R R E R R N L D F M E R K G E V T P I D P Y I C G V C G R K C K T N L D L K K H F K Q L
gm047989_Glyma1    A N R H A F V H L P Q W V L Q Q R R D R K N L D I L E R K G I I T P P E P Y T C G V C G R K C K T H L D L K K H F K Q L
 
AT5G52010.1     H E R E R Q K K V N R M R S L K G K K R Q K F K E R Y V S G N E K Y N E A A R S L L T P K V G Y G L E A E L R R A G V Y
gm047989_Glyma1    H Q R E R Q K K L N R L K S L K G K K R H R F K E R F L R G N H K Y D D A A R T L V V P K V G Y G L A A E L R R A G V F
 
AT5G52010.1     V K T V E D K P Q A A D W A V K R Q I Q H S M T R G I D W L V L V S D D K D F S D M L R K A R E A D L G T L V V S D M D
gm047989_Glyma1    V K T V Q D K P Q A A D W A L K R Q M V H S M S R G I D W L F L V S D D S D F S E M L R R A R E A D L G T V V V G D W D
 
AT5G52010.1     R A L G R H A D L W V P W S G V E K G E I G E K D L I P G K R P R F E E D E V G F G G N D E L F S L S Y D E D E K A E M
gm047989_Glyma1    R A L G R H A D L W V P W S G V E N G E V G - - D L V P K R R - - - - - - - - - - - - - - - - - - - - - R E N S R R R E
 
AT5G52010.1     T V E S D G F G R F N V S A F S E D E W V E D E G D F V L S D S S D D D S D D E L F
gm047989_Glyma1    Q G E E H G F G - - - - - - - - - - - - L E D - - - - - - - - - - D D D D D D - - -
 
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