fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017606 not found in 419aa AT5G52010.1 1st_1st 0.603797468 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G52010.1     MSLFCNSIET----LYPKPFLSHKS-----HFFTFS-NSKFQNPKFTSFPLRHQWRIESC
pt017606_POPTR_ MTPLCKAIDTTTASLLKPSILLHKTPLNFCHSLNYTPNLSNNNLTLTSKPPQNHLRPITA
                *: :*::*:*    *   .:* **:     * :.:: * . :* .:** * ::: *  :.

AT5G52010.1     LKSAS----SSEIDMVRNKEGIFAPKEKKVVVLWDLDNKPPRGPPYEAATALRKVAEKLG
pt017606_POPTR_ TANASHPAATSEIDMVKNRQGIYTSKQNKVVVLWDLDNKPPRGPPYPAAMALKTVAQRFG
                  .**    :******:*::**::.*::****************** ** **:.**:::*

AT5G52010.1     RVVEISAYANRHAFIHLPHWVVEERRERRNLDFMERKGEVTPIDPYICGVCGRKCKTNLD
pt017606_POPTR_ EVIDMCAYANRHAFIHLPHWVLEERRERKHLDILERKEIVSPSQPYVCGVCGRKCKTNLD
                .*:::.***************:******::**::***  *:* :**:*************

AT5G52010.1     LKKHFKQLHERERQKKVNRMRSLKGKKRQKFKERYVSGNEKYNEAARSLLTPKVGYGLEA
pt017606_POPTR_ LKKHFKQLHERERQKKVNRMRSLKGKKRQRYKERFVSGNHKYNEEARRLLTPKIGYGLAA
                *****************************::***:****.**** ** *****:**** *

AT5G52010.1     ELRRAGVYVKTVEDKPQAADWAVKRQIQHSMTRGIDWLVLVSDDKDFSDMLRKAREADLG
pt017606_POPTR_ ELKRAGVYVKTVEDKPQAADWALKRQIEHSMSRGVDWLVLVSDDSDFSEILRKAREANLG
                **:*******************:****:***:**:*********.***::*******:**

AT5G52010.1     TLVVSDMDRALGRHADLWVPWSGVEKGEIGEKDLIPGKRPRFEEDEVGFGGNDE-LFSLS
pt017606_POPTR_ TVVVGDRDRALGRHADLWVPWIGVENGELTEKDLVPKGRWRSEDLE-----NDEGLFSVT
                *:**.* ************** ***:**: ****:*  * * *: *     *** ***::

AT5G52010.1     YDEDEKAE------------MTVESDGFGRFNVSAFSEDEWVEDEGDFVLSDSSDDDS--
pt017606_POPTR_ -DFDEDGDYGGNDLEGFVDGLVMARSGFNGTRISAFSEGE-EEDEQDYLLYDSEYEEIEL
                 * **..:            :.:  .**.  .:*****.*  *** *::* **. ::   

AT5G52010.1     DDELF-
pt017606_POPTR_ EDGGFW
                :*  *
BoxShade v3.31 C (beta, 970507) Output
AT5G52010.1     M S L F C N S I E T - - - - L Y P K P F L S H K S - - - - - H F F T F S - N S K F Q N P K F T S F P L R H Q W R I E S C
pt017606_POPTR_    M T P L C K A I D T T T A S L L K P S I L L H K T P L N F C H S L N Y T P N L S N N N L T L T S K P P Q N H L R P I T A
 
AT5G52010.1     L K S A S - - - - S S E I D M V R N K E G I F A P K E K K V V V L W D L D N K P P R G P P Y E A A T A L R K V A E K L G
pt017606_POPTR_    T A N A S H P A A T S E I D M V K N R Q G I Y T S K Q N K V V V L W D L D N K P P R G P P Y P A A M A L K T V A Q R F G
 
AT5G52010.1     R V V E I S A Y A N R H A F I H L P H W V V E E R R E R R N L D F M E R K G E V T P I D P Y I C G V C G R K C K T N L D
pt017606_POPTR_    E V I D M C A Y A N R H A F I H L P H W V L E E R R E R K H L D I L E R K E I V S P S Q P Y V C G V C G R K C K T N L D
 
AT5G52010.1     L K K H F K Q L H E R E R Q K K V N R M R S L K G K K R Q K F K E R Y V S G N E K Y N E A A R S L L T P K V G Y G L E A
pt017606_POPTR_    L K K H F K Q L H E R E R Q K K V N R M R S L K G K K R Q R Y K E R F V S G N H K Y N E E A R R L L T P K I G Y G L A A
 
AT5G52010.1     E L R R A G V Y V K T V E D K P Q A A D W A V K R Q I Q H S M T R G I D W L V L V S D D K D F S D M L R K A R E A D L G
pt017606_POPTR_    E L K R A G V Y V K T V E D K P Q A A D W A L K R Q I E H S M S R G V D W L V L V S D D S D F S E I L R K A R E A N L G
 
AT5G52010.1     T L V V S D M D R A L G R H A D L W V P W S G V E K G E I G E K D L I P G K R P R F E E D E V G F G G N D E - L F S L S
pt017606_POPTR_    T V V V G D R D R A L G R H A D L W V P W I G V E N G E L T E K D L V P K G R W R S E D L E - - - - - N D E G L F S V T
 
AT5G52010.1     Y D E D E K A E - - - - - - - - - - - - M T V E S D G F G R F N V S A F S E D E W V E D E G D F V L S D S S D D D S - -
pt017606_POPTR_    - D F D E D G D Y G G N D L E G F V D G L V M A R S G F N G T R I S A F S E G E - E E D E Q D Y L L Y D S E Y E E I E L
 
AT5G52010.1     D D E L F -
pt017606_POPTR_    E D G G F W
 
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