fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023741 not found in 410aa AT5G52010.1 1st_1st 0.468354430 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G52010.1     MSLFCNSIETLYPKP--FLSHKSHFFTFSNSKFQNPKFTSFPLRHQWRIES------CLK
Os023741_Os06t0 -----------MPPPLSFLHLAANPTPLHASPLRRAR-----LRHRLSLRTDHPSRRAVA
                            * *  **   ::  .:  * ::..:     ***:  :.:      .: 

AT5G52010.1     SASSS-------------EIDMVRNKEGIFAPKEKKVVVLWDLDNKPPRGPPYEAATALR
Os023741_Os06t0 SASASAGENPSTPGGPIADVEMVRGKDGVWTARPPTVVVLWDLDNKPPRGPPFPAATALR
                ***:*             :::***.*:*:::.:  .****************: ******

AT5G52010.1     KVAEKLGRVVEISAYANRHAFIHLPHWVVEERRERRNLDFMERKGEVTPIDPYICGVCGR
Os023741_Os06t0 DAASLLGRVVSVSAFANRHAFSHVPAWVADERRERRAMDRAERAGAASPPVPYSCAVCGR
                ..*. *****.:**:****** *:* **.:****** :*  ** * .:*  ** *.****

AT5G52010.1     KCKTNLDLKKHFKQLHERERQKKVNRMRSLKGKKRQKFKERYVSGNEKYNEAARSLLTPK
Os023741_Os06t0 RFPTRPDLTRHFRQLHQRERNKKLSRLRSLKGKKRQKFRERFISGNTKYDDAARELLTPK
                :  *. **.:**:***:***:**:.*:***********:**::*** **::***.*****

AT5G52010.1     VGYGLEAELRRAGVYVKTVEDKPQAADWAVKRQIQHSMTRGIDWLVLVSDDKDFSDMLRK
Os023741_Os06t0 VGYGLAAELRRAGVHVRTVSDKPQAADHALKRQVKHSVACGVDWLVLVSDDSDFTDTVRK
                ***** ********:*:**.******* *:***::**:: *:*********.**:* :**

AT5G52010.1     AREADLGTLVVSDMDRALGRHADLWVPWSGVEKGEIGEKDLIPGKRPRF---EEDEVGFG
Os023741_Os06t0 ARAADLRTVVVGDGCRALGSVADIWLPWDRVENGEVDEDMLRNGTHMGFRDEEEDE----
                ** *** *:**.*  ****  **:*:**. **:**:.*. *  *.:  *   ****    

AT5G52010.1     GNDELFSLSYDEDEKAEMTVESDG------------FGRFNVSAFSEDEWVE-------D
Os023741_Os06t0 QDDDEFIVDWD-------TSDLDGVVDDIVATRTKLFGATTMSAFADEEIMDGILGVGIN
                 :*: * :.:*       * : **            **  .:***:::* ::       :

AT5G52010.1     EGDFVLSDSSDDDSDDELF
Os023741_Os06t0 GGDMLW--SSDDEDEDGYF
                 **::   ****:.:*  *
BoxShade v3.31 C (beta, 970507) Output
AT5G52010.1     M S L F C N S I E T L Y P K P - - F L S H K S H F F T F S N S K F Q N P K F T S F P L R H Q W R I E S - - - - - - C L K
Os023741_Os06t0    - - - - - - - - - - - M P P P L S F L H L A A N P T P L H A S P L R R A R - - - - - L R H R L S L R T D H P S R R A V A
 
AT5G52010.1     S A S S S - - - - - - - - - - - - - E I D M V R N K E G I F A P K E K K V V V L W D L D N K P P R G P P Y E A A T A L R
Os023741_Os06t0    S A S A S A G E N P S T P G G P I A D V E M V R G K D G V W T A R P P T V V V L W D L D N K P P R G P P F P A A T A L R
 
AT5G52010.1     K V A E K L G R V V E I S A Y A N R H A F I H L P H W V V E E R R E R R N L D F M E R K G E V T P I D P Y I C G V C G R
Os023741_Os06t0    D A A S L L G R V V S V S A F A N R H A F S H V P A W V A D E R R E R R A M D R A E R A G A A S P P V P Y S C A V C G R
 
AT5G52010.1     K C K T N L D L K K H F K Q L H E R E R Q K K V N R M R S L K G K K R Q K F K E R Y V S G N E K Y N E A A R S L L T P K
Os023741_Os06t0    R F P T R P D L T R H F R Q L H Q R E R N K K L S R L R S L K G K K R Q K F R E R F I S G N T K Y D D A A R E L L T P K
 
AT5G52010.1     V G Y G L E A E L R R A G V Y V K T V E D K P Q A A D W A V K R Q I Q H S M T R G I D W L V L V S D D K D F S D M L R K
Os023741_Os06t0    V G Y G L A A E L R R A G V H V R T V S D K P Q A A D H A L K R Q V K H S V A C G V D W L V L V S D D S D F T D T V R K
 
AT5G52010.1     A R E A D L G T L V V S D M D R A L G R H A D L W V P W S G V E K G E I G E K D L I P G K R P R F - - - E E D E V G F G
Os023741_Os06t0    A R A A D L R T V V V G D G C R A L G S V A D I W L P W D R V E N G E V D E D M L R N G T H M G F R D E E E D E - - - -
 
AT5G52010.1     G N D E L F S L S Y D E D E K A E M T V E S D G - - - - - - - - - - - - F G R F N V S A F S E D E W V E - - - - - - - D
Os023741_Os06t0    Q D D D E F I V D W D - - - - - - - T S D L D G V V D D I V A T R T K L F G A T T M S A F A D E E I M D G I L G V G I N
 
AT5G52010.1     E G D F V L S D S S D D D S D D E L F
Os023741_Os06t0    G G D M L W - - S S D D E D E D G Y F
 
0