fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039400 not found in 412aa AT5G52010.1 1st_1st 0.569620253 Ia
Gm047989 not found in 330aa AT5G52010.1 not_1st 0.556962025 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G52010.1     MSLFCNSIETLYPK-PFLSHKSHFFTFSNSKF--------------QNPKFTSFPL----
gm047989_Glyma1 ---------------------------------------MI--------TLPSIPLTTIT
gm039400_Glyma1 MKRKTGSLDFLAPQLPLSFYPSSGDAMNNSLFLLHNANAIIHFNFHSHPTLPSIP----R
                                                                 .:.*:*     

AT5G52010.1     --------RHQWRIESCLKS--ASSSEIDMVRNKEGIFAPKEKKVVVLWDLDNKPPRGPP
gm047989_Glyma1 TTKPFPHNRHFPRIQCCSNNNNNNSIEIDMVKNSQGIYAPKASKVVVLWDLDNKPPRGPP
gm039400_Glyma1 TTKPFPH-RHYPRIQCCSSN-----IQIDMVKNSQGIYAPKNDKVVVLWDLDNKPPRGAP
                        **  **:.* ..      :****:*.:**:*** .***************.*

AT5G52010.1     YEAATALRKVAEKLGRVVEISAYANRHAFIHLPHWVVEERRERRNLDFMERKGEVTPIDP
gm047989_Glyma1 YDVAISLKTLAARFGDLVDFSAYANRHAFVHLPQWVLQQRRDRKNLDILERKGIITPPEP
gm039400_Glyma1 YDAAVSLKTLAARFGHLVDFSAYANRHAFVHLPQWVLHQRRHRRNLDILERKGVITPPEP
                *:.* :*:.:* ::* :*::*********:***:**:.:**.*:***::**** :** :*

AT5G52010.1     YICGVCGRKCKTNLDLKKHFKQLHERERQKKVNRMRSLKGKKRQKFKERYVSGNEKYNEA
gm047989_Glyma1 YTCGVCGRKCKTHLDLKKHFKQLHQRERQKKLNRLKSLKGKKRHRFKERFLRGNHKYDDA
gm039400_Glyma1 YTCGVCGRKCKTHLDLKKHFKQLHQRERQKKLNRLKSLKGKKRHRFKERFLRGNHKYDDA
                * **********:***********:******:**::*******::****:: **.**::*

AT5G52010.1     ARSLLTPKVGYGLEAELRRAGVYVKTVEDKPQAADWAVKRQIQHSMTRGIDWLVLVSDDK
gm047989_Glyma1 ARTLVVPKVGYGLAAELRRAGVFVKTVQDKPQAADWALKRQMVHSMSRGIDWLFLVSDDS
gm039400_Glyma1 ARTLVVPKVGYGLAAELRRAGVFVKTVQDKPQAADWALKRQMVHSMSRGIDWLFLVSDDS
                **:*:.******* ********:****:*********:***: ***:******.*****.

AT5G52010.1     DFSDMLRKAREADLGTLVVSDMDRALGRHADLWVPWSGVEKGEIGEKDLIPGK-----RP
gm047989_Glyma1 DFSEMLRRAREADLGTVVVGDWDRALGRHADLWVPWSGVENGEVG--DLVPKRRRENSRR
gm039400_Glyma1 DFSEMLRRAREADLGTVVVGDWDKALGRHADLWVPWSGVENGEVG--DLLPKRRRENSRR
                ***:***:********:**.* *:****************:**:*  **:* :     * 

AT5G52010.1     RFEEDEVGFGGNDELFSLSYDEDEKAEMTVESDGFGRFNVSAFSEDEWVEDEGDFVLSDS
gm047989_Glyma1 REQGEEHGFGLED-----------------------------------------------
gm039400_Glyma1 REQGEEHGFGLEDDDGGVFLNEDEE---------LGQEFMLLYSED---EDE-DVDVEDY
                * : :* *** :*                                               

AT5G52010.1     SDDDSDDE-----LF--
gm047989_Glyma1 -DDDDDD----------
gm039400_Glyma1 YDDDDDDEEEEDGFYIL
                 ***.**
BoxShade v3.31 C (beta, 970507) Output
AT5G52010.1     M S L F C N S I E T L Y P K - P F L S H K S H F F T F S N S K F - - - - - - - - - - - - - - Q N P K F T S F P L - - - -
gm047989_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M I - - - - - - - - T L P S I P L T T I T
gm039400_Glyma1    M K R K T G S L D F L A P Q L P L S F Y P S S G D A M N N S L F L L H N A N A I I H F N F H S H P T L P S I P - - - - R
 
AT5G52010.1     - - - - - - - - R H Q W R I E S C L K S - - A S S S E I D M V R N K E G I F A P K E K K V V V L W D L D N K P P R G P P
gm047989_Glyma1    T T K P F P H N R H F P R I Q C C S N N N N N N S I E I D M V K N S Q G I Y A P K A S K V V V L W D L D N K P P R G P P
gm039400_Glyma1    T T K P F P H - R H Y P R I Q C C S S N - - - - - I Q I D M V K N S Q G I Y A P K N D K V V V L W D L D N K P P R G A P
 
AT5G52010.1     Y E A A T A L R K V A E K L G R V V E I S A Y A N R H A F I H L P H W V V E E R R E R R N L D F M E R K G E V T P I D P
gm047989_Glyma1    Y D V A I S L K T L A A R F G D L V D F S A Y A N R H A F V H L P Q W V L Q Q R R D R K N L D I L E R K G I I T P P E P
gm039400_Glyma1    Y D A A V S L K T L A A R F G H L V D F S A Y A N R H A F V H L P Q W V L H Q R R H R R N L D I L E R K G V I T P P E P
 
AT5G52010.1     Y I C G V C G R K C K T N L D L K K H F K Q L H E R E R Q K K V N R M R S L K G K K R Q K F K E R Y V S G N E K Y N E A
gm047989_Glyma1    Y T C G V C G R K C K T H L D L K K H F K Q L H Q R E R Q K K L N R L K S L K G K K R H R F K E R F L R G N H K Y D D A
gm039400_Glyma1    Y T C G V C G R K C K T H L D L K K H F K Q L H Q R E R Q K K L N R L K S L K G K K R H R F K E R F L R G N H K Y D D A
 
AT5G52010.1     A R S L L T P K V G Y G L E A E L R R A G V Y V K T V E D K P Q A A D W A V K R Q I Q H S M T R G I D W L V L V S D D K
gm047989_Glyma1    A R T L V V P K V G Y G L A A E L R R A G V F V K T V Q D K P Q A A D W A L K R Q M V H S M S R G I D W L F L V S D D S
gm039400_Glyma1    A R T L V V P K V G Y G L A A E L R R A G V F V K T V Q D K P Q A A D W A L K R Q M V H S M S R G I D W L F L V S D D S
 
AT5G52010.1     D F S D M L R K A R E A D L G T L V V S D M D R A L G R H A D L W V P W S G V E K G E I G E K D L I P G K - - - - - R P
gm047989_Glyma1    D F S E M L R R A R E A D L G T V V V G D W D R A L G R H A D L W V P W S G V E N G E V G - - D L V P K R R R E N S R R
gm039400_Glyma1    D F S E M L R R A R E A D L G T V V V G D W D K A L G R H A D L W V P W S G V E N G E V G - - D L L P K R R R E N S R R
 
AT5G52010.1     R F E E D E V G F G G N D E L F S L S Y D E D E K A E M T V E S D G F G R F N V S A F S E D E W V E D E G D F V L S D S
gm047989_Glyma1    R E Q G E E H G F G L E D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm039400_Glyma1    R E Q G E E H G F G L E D D D G G V F L N E D E E - - - - - - - - - L G Q E F M L L Y S E D - - - E D E - D V D V E D Y
 
AT5G52010.1     S D D D S D D E - - - - - L F - -
gm047989_Glyma1    - D D D D D D - - - - - - - - - -
gm039400_Glyma1    Y D D D D D D E E E E D G F Y I L
 
0