fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52020.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024198 not found in 282aa AT5G52020.1 1st_1st 0.404255319 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G52020.1     MSNNNNSPTTVNQE-----TTTSREV-----SITLPTDQSPQTSPGSSSS-------PSP
pt024198_POPTR_ MANTNSNVPQADQSPPPQPSNPSIQVPDPPSSILLPILQDDQYAPHSTSSNKSPRLIPSP
                *:*.*.. . .:*.     :..* :*     ** **  *. * :* *:**       ***

AT5G52020.1     --------------------------------------RPSGGSPARRTATGLSGKHSIF
pt024198_POPTR_ AGSLGQPLTVRQDEYSPRFGFPGQPVSGRQDDQSPRSTRSSGGSSTQPT----SGRHPSY
                                                      *.****.:: *    **:*. :

AT5G52020.1     RGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFPGLALT
pt024198_POPTR_ KGIRLRSGKWVSEIREPRKTTRVWLGTYPTPEMAAAAYDAAALALKGPDTPLNFPESILS
                :*****.***************:******.*********.*********: ****   *:

AT5G52020.1     YVAPVSNSAADIRAAASRAAEMK--QPDQGGDEKVLEPVQPGKEEELEEVSCNSCSL---
pt024198_POPTR_ YPIPASASSSDIRAAAASAASSRSPRPEAG----------PNPERDRLETEGTSSSTTTA
                *  *.* *::******: **. :  :*: *          *. *.:  *.. .*.*    

AT5G52020.1     ------EFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDNLWSYK
pt024198_POPTR_ DIQSGQEFIDEEELLNLPSLLVDMAGGMLVSPPR--INTPSSDDSPGNSDAENLWSYH
                      **:*** :**:*:**.:** ***:****  *:.. .**** * :.:*****:
BoxShade v3.31 C (beta, 970507) Output
AT5G52020.1     M S N N N N S P T T V N Q E - - - - - T T T S R E V - - - - - S I T L P T D Q S P Q T S P G S S S S - - - - - - - P S P
pt024198_POPTR_    M A N T N S N V P Q A D Q S P P P Q P S N P S I Q V P D P P S S I L L P I L Q D D Q Y A P H S T S S N K S P R L I P S P
 
AT5G52020.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R P S G G S P A R R T A T G L S G K H S I F
pt024198_POPTR_    A G S L G Q P L T V R Q D E Y S P R F G F P G Q P V S G R Q D D Q S P R S T R S S G G S S T Q P T - - - - S G R H P S Y
 
AT5G52020.1     R G I R L R N G K W V S E I R E P R K T T R I W L G T Y P V P E M A A A A Y D V A A L A L K G P D A V L N F P G L A L T
pt024198_POPTR_    K G I R L R S G K W V S E I R E P R K T T R V W L G T Y P T P E M A A A A Y D A A A L A L K G P D T P L N F P E S I L S
 
AT5G52020.1     Y V A P V S N S A A D I R A A A S R A A E M K - - Q P D Q G G D E K V L E P V Q P G K E E E L E E V S C N S C S L - - -
pt024198_POPTR_    Y P I P A S A S S S D I R A A A A S A A S S R S P R P E A G - - - - - - - - - - P N P E R D R L E T E G T S S S T T T A
 
AT5G52020.1     - - - - - - E F M D E E A M L N M P T L L T E M A E G M L M S P P R M M I H P T M E D D S P E N H E G D N L W S Y K
pt024198_POPTR_    D I Q S G Q E F I D E E E L L N L P S L L V D M A G G M L V S P P R - - I N T P S S D D S P G N S D A E N L W S Y H
 
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