fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52020.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009253 not found in 261aa AT5G52020.1 1st_1st 0.348404255 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G52020.1     MSN--NNNSPTTVNQETTTSREVSIT-------LPTDQSPQTSPGSSSSPS-PRPSGGSP
Os009253_Os02t0 MADLTEHPSPTAPPQVQTAGLPAAASPGPASPHSPSEQGDKTAPGAATASTMTTASSGEP
                *::  :: ***:  *  *:.  .: :        *::*. :*:**::::.: . .*.*.*

AT5G52020.1     ARRTATGLSGKHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALAL
Os009253_Os02t0 SPRS----SGKHAFYRGIRCRSGKWVSEIREPRKARRIWLGTYPTAEMAAAAYDVAARAL
                : *:    ****:::**** *.************: ********..*********** **

AT5G52020.1     KGPDAVLNFPGLALTYVAPVSNSAADIRAAASRAA-------------------------
Os009253_Os02t0 RGADAVLNFPGATASRPVPASASPADIRAAAAAAAAAAAHLERPHGPTGTAYPATAAAEH
                :*.******** : :  .*.* *.*******: **                         

AT5G52020.1     -EMKQPDQGG-------DEKVLEPVQPGKEEELEEVSCNSCSLEFMDEEAMLNMPTLLTE
Os009253_Os02t0 HQQQQQQQYGSGSPAADDVSGYPPMEGGIGND-----------DFMDEEAIFELPQLLRN
                 : :* :* *       * .   *:: *  ::           :******::::* ** :

AT5G52020.1     MAEGMLMSPPRMMIHPTMEDDSPENHE-GDNLWSYK--
Os009253_Os02t0 MAAGMMMSPPRL--SPTTSDVSPEPSEAGESLWSYRDP
                ** **:*****:   ** .* ***  * *:.****:
BoxShade v3.31 C (beta, 970507) Output
AT5G52020.1     M S N - - N N N S P T T V N Q E T T T S R E V S I T - - - - - - - L P T D Q S P Q T S P G S S S S P S - P R P S G G S P
Os009253_Os02t0    M A D L T E H P S P T A P P Q V Q T A G L P A A A S P G P A S P H S P S E Q G D K T A P G A A T A S T M T T A S S G E P
 
AT5G52020.1     A R R T A T G L S G K H S I F R G I R L R N G K W V S E I R E P R K T T R I W L G T Y P V P E M A A A A Y D V A A L A L
Os009253_Os02t0    S P R S - - - - S G K H A F Y R G I R C R S G K W V S E I R E P R K A R R I W L G T Y P T A E M A A A A Y D V A A R A L
 
AT5G52020.1     K G P D A V L N F P G L A L T Y V A P V S N S A A D I R A A A S R A A - - - - - - - - - - - - - - - - - - - - - - - - -
Os009253_Os02t0    R G A D A V L N F P G A T A S R P V P A S A S P A D I R A A A A A A A A A A A H L E R P H G P T G T A Y P A T A A A E H
 
AT5G52020.1     - E M K Q P D Q G G - - - - - - - D E K V L E P V Q P G K E E E L E E V S C N S C S L E F M D E E A M L N M P T L L T E
Os009253_Os02t0    H Q Q Q Q Q Q Q Y G S G S P A A D D V S G Y P P M E G G I G N D - - - - - - - - - - - D F M D E E A I F E L P Q L L R N
 
AT5G52020.1     M A E G M L M S P P R M M I H P T M E D D S P E N H E - G D N L W S Y K - -
Os009253_Os02t0    M A A G M M M S P P R L - - S P T T S D V S P E P S E A G E S L W S Y R D P
 
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